Cuculus canorus (common cuckoo): 104066382
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Entry
104066382 CDS
T08597
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03020
RNA polymerase
cuca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104066382 (POLR2D)
09124 Replication and repair
03420 Nucleotide excision repair
104066382 (POLR2D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104066382 (POLR2D)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104066382 (POLR2D)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
104066382 (POLR2D)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104066382 (POLR2D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Maelstrom
BIG2_C
Motif
Other DBs
NCBI-GeneID:
104066382
NCBI-ProteinID:
XP_009567271
UniProt:
A0A091H798
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Position
9:2526878..2532210
Genome browser
AA seq
142 aa
AA seq
DB search
MAAGGSDPRAGDVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcggcagcgacccgcgggcgggagatgtggaggaagatgcctcgcagctc
gtcttccctaaagaatttgaaactgcggaaactcttctgaattcggaagtacatatgctt
cttgagcatcgtaagcaacagaatgagagtgcggaagatgagcaggagctttcagaggtc
ttcatgaaaaccctgaactacacggcgcgcttcagccgcttcaaaaaccgtgaaaccatt
gccagcgtccgtagtttactgctccagaagaagctccataaatttgaactggcatgtttg
gccaacctgtgtcctgagacagctgaggaagcgaaggcattgattcctagcctggaggga
cgatttgaagatgaggaattacagcagattcttgatgacattcagactaagcgcagcttc
cagtactag
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