Cuculus canorus (common cuckoo): 104066390
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Entry
104066390 CDS
T08597
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104066390 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
104066390 (COPB2)
Membrane trafficking [BR:
cuca04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104066390 (COPB2)
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104066390 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
104066390
NCBI-ProteinID:
XP_053929835
LinkDB
All DBs
Position
9:complement(4158903..4176123)
Genome browser
AA seq
913 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLAELRPAREYPLVIPNEERNLLEEAK
GFEPSGVMAPQKKVEEPIPSPRQEAMKTVLQNSDPLPTRDQKTLLDLEDDLDNLDLEDID
TTDINLDEEILDE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgacttgatataaaacggaaactaacagctcggtctgaccgggtgaagagt
gttgacttgcatcccacagaaccatggatgctggctagcctttacaatggcagtgtttgt
gtttggaaccatgaaacacagactctggtgaagacttttgaagtgtgtgacctgccagtg
agagctgctaaattcgtggcaagaaagaactgggttgttacaggagctgatgatatgcaa
attagagtttttaattataacaccttggaacgagttcacatgtttgaagcacattcagat
tacatccgttgtattgctgtgcatcccacacagcctttcatactgacaagcagcgatgac
atgctcattaaactctgggactgggataaaaaatggtcttgttctcaggtgtttgaagga
cacacccactatgtcatgcagattgtcataaacccgaaggacaataatcagtttgccagc
gcctctttggataggacaatcaaggtgtggcagcttggctcctcttcacccaactttact
ttggaaggccacgagaagggagtgaactgcattgactactacagcggaggagacaagcca
tatctcatctcgggtgcggatgaccggttggttaagatctgggactaccagaataaaaca
tgtgtccaaacactggaaggacatgctcaaaatgtgtcatgtgtcagcttccaccctgaa
ctgcccatcattatcacaggctcagaagatggaaccgtgcgcatttggcactcaagcact
taccgcctggaaagtaccctcaactacggaatggagagagtgtggtgtgtggccagttta
agaggatccaataatgtggctttgggatatgatgaaggcagcattattgttaagcttggt
cgtgaagaacctgccatgtccatggatgcaaatggaaaaattatttgggctaaacattca
gaagtccaacaggcaaacttgaaagcgatgggagatactgaaatcaaagatggagaaaga
ttgccgctggctgtaaaggatatggggagctgtgaaatctatcctcagaccattcagcac
aaccctaatggacggtttgtggtagtgtgtggtgacggtgagtacatcatctacacagcg
atggctttgagaaacaagagctttggttctgcacaggagttcgtatgggcacatgattct
tcagaatacgccatcagggagagcaacagtgttgtaaagatatttaaaaatttcaaagag
aagaagtcattcaaacccgattttggagcggaaggcatctacggtgggttcctgttgggc
gtcagatctgttaatggtttggcattctatgattgggaaaacacagaactgattcgcaga
attgaaattcagcccaaacatattttctggtctgactcgggtgagctcgtttgcatcgcc
acggaagagtcattcttcattctgaaatacctgtcagaaaaagtcgcagcagcccaagaa
acacatgaaggtgtcactgaagatggaattgaagatgcgtttgaggttctcggtgagatt
caggagattgtgaaaacaggcttgtgggttggtgactgctttatttacaccagctctgtg
aacagactcaactattacgttggaggagaaattgtcactattgcccatttagacaggaca
atgtatctcttgggctatatccctaaggacaaccggctttatttgggtgataaagagcta
aacattgttagctactctttgctggtctccgtgcttgaatatcaaacggctgtaatgaga
agagattttggtatggctgataaagttcttcccacaattccgaaagaacagagaaccaga
gttgcgcattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatctacagat
ccagaacatcgtttcgaacttgctcttcaacttggagaattaaaaatagcctatcagctt
gcagtggaagcagagtcagaacagaaatggaagcaacttgctgagcttgccattagcaaa
tgccagtttggcttagcccaggagtgtctccaccacgcgcaagactatggagggctgctg
ctcctggctacagcttcaggaaacgccaacatggtgaataaattagctgaaggagcagaa
aaagatggcaagaacaatgttgcatttatgagctacttcctgcagggaaagcttgattca
tgtttagaactcctgattaaaaccgggcgtctcccagaagctgcttttcttgcacggact
tacttgcccagccaagtttccagagttgttaaactgtggcgggagaatctctctaaagtc
aatcaaaaagctgccgagtcccttgctgatcctacagaatatgagaatcttttccctgga
ctgaaggaggctttcgttgctgaagaatatgttaaacaaagtcttgctgagttgcggcca
gccagggaatacccccttgtcattccaaacgaagaaagaaacttacttgaagaagcaaaa
ggctttgagccttctggagtaatggcacctcagaagaaggttgaagaaccaattccatct
cccagacaagaagccatgaagacagttttgcagaattctgacccacttccaacaagagat
caaaagacactgctggacttggaagatgacctggataacttggatctggaggatattgat
accacagatatcaatctggatgaagagatcttagatgagtga
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