Cuculus canorus (common cuckoo): 104066459
Help
Entry
104066459 CDS
T08597
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X2
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104066459 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104066459 (CPSF3)
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104066459 (CPSF3)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104066459 (CPSF3)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104066459 (CPSF3)
U7-dependent histone pre-mRNA processing factors
104066459 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
104066459
NCBI-ProteinID:
XP_009567351
LinkDB
All DBs
Position
3:complement(66167464..66191310)
Genome browser
AA seq
691 aa
AA seq
DB search
MSAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKL
TGDVEEIEIQQKPALKVFRNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVHKISKKVDMDVYRKRMEIMLQDMFGEDCVSSKDGSVLSVTVDGKTANISLDTRTV
DCEPGSEDDESLREMLELAAQRLYDALSPVH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaagcggaaagcggaggcgctgatcccggcggaggagagcgaccagctgctc
atccggcccctgggtgctggccaagaagtaggaaggtcatgcattatcctggaatttaaa
ggaagaaaaataatgcttgattgtggaatccatcctggactggaaggaatggatgctctt
ccttacattgatttgatagatcctgctgagattgatcttctcctaattagtcatttccat
ttagatcactgtggggctttaccatggtttttgcagaaaacaagttttaaaggaaggacg
tttatgactcatgccacaaaagctatttatagatggctgctttcagactatgtcaaagtc
agtaatatatcagcggatgacatgctatatacagaaacagaccttgaagaaagcatggac
aagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgt
taccacgccggccacgttctgggagcagccatgtttatgattgaaatagctggtgtgaag
cttttatatacaggtgatttctcaagacaagaagacagacatctgatggcagctgagatt
cccaatatcaaacccgatattcttataattgaatccacgtacggtactcacattcatgaa
aaaagggaagagcgagaggcccgattctgtaatactgttcacgacattgtaaatagagga
ggtagaggccttattcctgtgtttgccctgggtcgagctcaagaactacttttaatttta
gatgaatactggcaaaatcaccctgaactccatgatatccctatatactatgcctcctct
ttggcaaagaaatgtatggctgtttatcaaacgtacgtcaatgccatgaatgacaaaatc
cgcaagcaaattaacatcaacaatccatttgttttcaagcatattagtaatctgaagagt
atggatcattttgacgatattggcccaagtgttgtgatggcttccccaggtatgatgcag
agtggcttatccagagagttgtttgagagctggtgcacggataagagaaacggagtaatt
atagcagggtactgtgttgaaggaacgcttgctaagcacatcatgtctgaacctgaagag
atcacaaccatgtcaggtcaaaaactaccgctgaagatgtctgtggattacatttctttc
tctgctcacacagattaccaacaaaccagtgaatttatccgggccttgaaacctccacac
gtgatattagttcatggtgaacagaatgaaatggccaggttgaaagcagcattgatacgg
gaatatgaggataatgatgaagttcatatcgaggttcataatcctaggaatactgaagct
gtgacattaaacttcagaggagagaaacttgccaaggtgatgggatctttagcagataag
aaaccagagcaaggacagagaatttctggaatcctagttaaaagaaattttaactatcac
attctttctccgtgtgacctctccaattatacagacttggcgatgagcactgtaacacag
acacaagccattccatataccggcccttttaatctgctttattatcagctgcaaaaactt
actggtgatgtagaagaaatagaaattcaacaaaaaccagccctgaaggttttcagaaat
attactgtgatccaggaaccaggcatggtagtccttgagtgggtggcaaatcctgcaaat
gatatgtatgcagacactgtgacaacagtgatactggaagttcagtcaaatcccaaaata
cagaaagctgcagtacataaaatttccaagaaagtagatatggatgtgtacaggaagaga
atggagatcatgctgcaggatatgtttggagaagactgtgtgagttcaaaagatggctct
gtcttgagtgtcacggttgatgggaagactgcaaacatttcactggacactcggacagtt
gactgtgagccgggaagtgaagatgacgaatcccttcgtgaaatgctggaactggctgca
cagaggctttacgatgccctcagcccagtacactga
DBGET
integrated database retrieval system
