Cuculus canorus (common cuckoo): 104066530
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Entry
104066530 CDS
T08597
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104066530 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104066530 (SPAST)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
104066530 (SPAST)
Membrane trafficking [BR:
cuca04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104066530 (SPAST)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104066530 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_14
MIT
IstB_IS21
AAA_24
DUF815
NPHP3_N
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
104066530
NCBI-ProteinID:
XP_009567442
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All DBs
Position
3:106054053..106089377
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AA seq
592 aa
AA seq
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MNSPGGRGKKKGSAGSSSAPPAAGSPRSAPAPSPHKRNLYLFSYPLFAAFALLRFVAFQL
GLLFAWLCERLSPMAARGGGRAGPEAGGAAEAVRGCHKRAFECISMALRIDEDEAAGQKE
QAVEWYKKGIEELEKGIAVLVIGQGEQCERARRLQSKMMTNLAMAKDRLQLLEKLQAVLQ
ISKPQMEVCNDSTNLACRNGHLQSESGAVPKKKDPLTHTSNSLPRSKTVAKTGSTGLSGH
HRTPSYSGISASVSRPAPNPTATTHKAAPKNSRTNKPSTPTPAPRKKKDAKIFRNVDSNL
ANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPP
GNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD
SLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRV
YVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIREL
KPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEAYIRWNKDFGDTTV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccaggcggcagagggaaaaagaagggctcagccggctccagctccgcgccc
ccggccgcggggtccccccgctcggcgccggcgccgtccccgcacaagcggaacctttac
ctcttctcgtacccgctcttcgccgccttcgcgctgctccgcttcgtcgccttccagctg
gggctgctgttcgcctggctctgcgagcgcctgtccccgatggcggcccggggcggcggc
agggccgggcccgaggcgggcggcgcggccgaggcggtgcggggctgccacaagcgcgcc
ttcgagtgcatctccatggcgctgcgcatcgacgaggacgaggccgcaggacaaaaggaa
caagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtctta
gtaattggtcaaggtgagcagtgtgaacgggctcgacgtctgcaatctaaaatgatgaca
aatttggcaatggccaaggatcgcttgcagcttttagagaagctgcaggcagttttgcaa
atttccaagccgcaaatggaggtctgtaatgacagtactaacctggcatgccgcaacgga
catctccagtcagaaagtggagcggttccaaaaaagaaggatcccttaacacacacaagt
aattcccttcctcgttcaaaaactgttgcaaaaactggatccacaggcctttcaggtcat
catagaacaccaagctacagcgggatatcagcttcggtgtctagaccagcacctaatccc
acagctacaactcataaggctgctcctaaaaacagcagaacaaataagccttctactcct
acccctgctcctcgaaaaaagaaagacgcgaagatatttagaaatgttgacagtaatctt
gctaatcttatcctgaatgaaattgttgatagtgggccagctgtcaaatttgatgatatt
gcagggcaggaactggctaaacaagctttgcaagaaattgttatccttccttctcttaga
cctgagttatttacaggactcagagctcctgcacgtggtttattgttgtttggcccacca
ggaaatgggaagacaatgttggccaaggcagttgctgcagaatcaaacgctactttcttt
aatataagtgcagcgagcctaacttcaaaatacgtgggtgaaggggagaaactggtgcgt
gctttatttgcagtagccagagaacttcagccttctataatttttattgatgaagttgat
agccttctctgtgaaagacgagaaggtgaacacgatgccagtaggcgtctaaaaacagag
tttttaatagaatttgatggtgtgcagtcttctggagaggacagaatacttgtgatggga
gcaacaaacaggccacaggagcttgatgatgctgttctcagacgattcaccaaacgggta
tatgtgtctttaccaaatgaggaaacaagattgattttgttaaaaaatcttctaagcaag
caaggaagtccattgacccaaaaagaattggcacaactagctagaatgacagatggatac
tctggaagtgatttaaccgcattagcaaaggatgctgcactggggcctattcgagaatta
aaaccggaacaggtgaagaacatgtctgccagtgagatgagaaatatcaaactatcagat
ttcactgagtctttgaagaagataaagcgcagtttgagcccacagaccctggaagcatat
attcgctggaacaaggactttggagataccacagtgtga
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