Cuculus canorus (common cuckoo): 104066670
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Entry
104066670 CDS
T08597
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104066670 (ZEB1)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
104066670 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
104066670
NCBI-ProteinID:
XP_053913688
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All DBs
Position
2:144888379..145009608
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AA seq
1113 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHAVLPENSEREGSTNSCWEDEAGKETKETLGPEAQADEVGCTVKEDECDSDAENE
QNHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDQRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKTSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPVNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETISNASIPQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENTVPTNSCKNEKLPEDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKNPPQLPQPSGTEAEKPSSPAPSENGESNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQTGQISVQSSGPSSPEQVKLSSPAGND
DQAATTDVSESQNSTNNSQNPVNTTKSQTLPGGSTLNGSRSSTPSPSPLNLSSSRNSQGY
VYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSITDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAIQETPPKQTQANGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEETGQEVLSNEHAGARASPSQ
IDSDERESLTREEEEDSEKEEEEEEEKEVEGLQEEKECRKLQEVEDEDEDEDEEEEEEGK
TEGNKNCEDVNQVSNAEPEVIQNNGQVSEEKNK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcaggcgaacccgcgccgcaacaacgtc
accaactataataacgtggtagaagcaaactcagattcggatgatgaagataaattgcat
atagtggaggaagaaagtgtaactgatgcagcagactgtgatgctagtgtgccagaagat
gacttgccaacagaccatgcagtattaccagaaaacagtgaaagagaagggagtacaaac
agttgctgggaagatgaagctggaaaagaaacgaaggaaaccctggggcctgaagctcag
gcagatgaagttggatgtacagtaaaagaagatgaatgtgattctgatgcagaaaatgaa
caaaaccatgaccctaatgttgaagaattccttcaacaagaagatacagctgtcatttac
cctgaagcacctgaggaggaccagagacaaggcacaccagaagctagtggtcaggatgaa
aatgggacgcctgatgcattttcgcaactgcttacttgcccatattgtgatcgagggtac
aagcgttttacctctctgaaggagcacattaaataccgccatgaaaagaatgaagataac
tttagttgctccttgtgcagttacacatttgcatacagaactcagcttgaccgccacatg
acatcacacaaatcaggaagagatcaaagacatgtgacgcagtccagtggcaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggaacaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgagcccggtcagggctaaagacatctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagag
caacttcctgttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgttcaacccctttgcagaatggggtttttagtggtggtagc
ccattgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagta
ggtctggtgtctcccataagcatcaacttaagtgacattcaaaatgtacttaaagtggca
gtggatggtaatgtaataaggcaagtattggaaaacaatcacgctaatcttgcatccaaa
gaacaagaaacaatcagcaatgcatctataccacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagcttg
gagcagccaagtcaacttcaggttgttccacaaaatctaaaaaaggaaaacactgttcct
acaaatagttgcaaaaatgaaaaattaccagaagatcttacggtgaagtctgagaaagat
aagaactttgaaggagagaccaatgatagcacttgtcttctttgtgatgactgtccaggg
gatcttaatgcacttcaagaattaaagcactatgaaactaaaaatcctcctcagcttcct
cagcccagtggaacagaagctgagaagcccagctctcctgccccatcagaaaatggggag
agcaacttatctcctggtcagccacctttaaagaaccttttatcactcctaaaagcatat
tatgcattaaatgcacaaccaagcgcagaagagctttcaaaaatagcagattcagtaaat
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaaactggacaaatttctgtg
cagtcttctggaccatcttctcctgaacaagttaaattaagcagtcccgcaggtaatgat
gatcaagcagcaactacagatgtgagtgagtcccagaacagcacaaataattcacaaaat
cccgtcaatacaacaaaatctcagactttaccagggggatcgactctgaatggctcacgc
agtagcacaccatccccatcaccactaaacctttcttcatcaagaaattcacagggttat
gtgtacacagcagagggtgtacaagaagagccacaaattgaacctcttgacctttcgcta
ccaaagcaacatggagaactattggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtattacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccatgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttacacatactctactacagttagtcctgcaattcaagaaacaccaccaaaa
cagacccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggagtatcg
aatgtagaagatcaaaatgattctgattcaacacccccaaagaaaaagatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcgttg
ttgagacacaagtatgaacacacaggtaaaagacctcatgagtgtggaatctgtaaaaaa
gcatttaaacacaaacaccatttgattgaacacatgcgactgcattctggggaaaaaccc
taccaatgtgacaaatgtggaaagcggttttcacactcggggtcttactctcaacacatg
aatcatcgctactcctactgcaaaagagaggcagaagagcgtgacagtacagagcaggag
gagacaggccaagaggtcctcagtaacgagcatgctggtgccagggcgtccccgtcgcag
attgactcggatgagagagagagtttaaccagggaagaagaggaagacagtgaaaaagag
gaagaggaggaggaagaaaaagaagtagaaggacttcaggaagaaaaagaatgtaggaaa
ttacaagaagtagaggatgaagatgaagatgaagatgaagaagaagaagaagaagggaaa
actgaaggtaacaagaattgtgaagatgtaaatcaagtaagcaatgcagaaccagaagtt
atacagaataatgggcaggtttcagaagaaaaaaacaaataa
DBGET
integrated database retrieval system
