Cuculus canorus (common cuckoo): 104066754
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Entry
104066754 CDS
T08597
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104066754 (RRP9)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
90S particles
Other 90S particles
104066754 (RRP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_RIG_2nd
VPS8_N
WDR54
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_Nup120_160
WD40_like
Beta-prop_LRRK2
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
104066754
NCBI-ProteinID:
XP_053932838
LinkDB
All DBs
Position
11:3733984..3737679
Genome browser
AA seq
484 aa
AA seq
DB search
MAAAAGGGRRAQGPRGAAGRRRRPRAAAVPGAEGRPRAAAGRAVDEEVSSESETESPLLG
RRRREAAEEEEVDETPQEKKLRLAKQYLEELRQYEEERAADEEEEETQLVDLIGDRLKED
VLEQKGRLQRFVAKDVQPPDPASIRVLRGHQLPVTCLVISPDDKFIFSASKDGSLIKWEV
ESGKRLCMVPGGKKGSEERHLGHASHILCMAISSDGKYLATGDRNKLIMIWDAATCKRLH
IFTGHRDAVSGLSFRKNTHQLYSASHDRSVKVWNVAENAYMETLFGHQDIITGLDSLSRD
CCVTAGGRDGTVRLWKIPEESQLVFCGHQGSIDCIQLINEEHMVSGADDGSIALWGLTKK
KPLALARQAHGMREAQGLQEPYWISAVAALRNSDLLATGSHSASVKLWKCGEGFRKLEPL
WDIPLVGFVNSLKFSATGDFLVAGVGQEHRLGRWWRLKEAKNCICIIPLKRMAAAPSPEA
SDSS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggggggcggcaggagggcccagggcccgcggggggcggcggggcgg
cggcggcggccgcgggcggcagcggtcccgggcgccgaggggaggccgcgggcggcagcc
ggccgggccgtcgacgaagaggtgtccagcgagtccgagacggagagcccgttgctgggc
cggcggcggcgggaggcagcagaggaggaagaggtggacgagacgccgcaggagaagaag
ctgcgcctggccaagcagtacctggaggagctccgccagtacgaggaggagcgggcggca
gatgaggaagaggaggagacccaactggtggatctcatcggtgaccggctgaaggaggat
gtgctcgagcagaaaggccggttgcagcgcttcgttgccaaagacgtgcagcctccagat
ccagccagcatccgagtgctgcgagggcaccagctgcctgtcacctgccttgtcatctct
ccggatgacaagttcatcttttctgcttccaaggatggctccctcatcaaatgggaggtg
gagagtgggaagaggctgtgcatggtacccggcgggaagaagggcagtgaggagcggcac
ttggggcacgcgtcccacatcctgtgcatggccatctcgtcagacggcaagtacctggct
acgggtgacaggaacaagctgatcatgatctgggatgcagccacctgcaagcggctgcac
atcttcactgggcaccgtgacgctgtctcgggcctgtccttccggaagaacacgcaccag
ctgtacagcgcctcccatgaccgcagtgtcaaggtctggaatgtggcggagaacgcatac
atggagaccctgtttgggcaccaagatatcatcacagggctggacagtctgagccgggac
tgctgcgtgacggcggggggacgggacggcaccgtgcggctctggaagatccctgaggag
tcacagctcgtgttttgtgggcaccagggctccattgactgcatccaactcatcaatgag
gagcacatggtgtcgggggccgatgacgggtccatagccctgtgggggctgacgaagaag
aagccactggctctggcccggcaggcgcacggcatgcgggaagcccagggcctgcaggaa
ccatactggatctcagctgtggctgcgctgcgcaacagtgacctcctggctacaggctct
cacagtgccagcgtgaagctctggaagtgcggtgagggatttcggaagctggagcccctc
tgggacatccccttggtgggttttgtcaacagcctcaagttctcagcaaccggtgatttc
ctggtggccggcgttgggcaggagcaccggcttggacggtggtggagactcaaagaagcc
aaaaattgcatctgcatcatccccctgaagcggatggcagcagcccccagtcctgaagcc
tccgacagctcctaa
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