Cuculus canorus (common cuckoo): 104066775
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Entry
104066775 CDS
T08597
Symbol
CDH20
Name
(RefSeq) cadherin-20
KO
K06807
cadherin 20, type 2
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104066775 (CDH20)
Cell adhesion molecules [BR:
cuca04515
]
Cadherins
Major cadherins
104066775 (CDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
104066775
NCBI-ProteinID:
XP_053916026
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Position
2:86729200..86848566
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AA seq
798 aa
AA seq
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MWTSGRMSNAKNLLGLGVSLYFWGLMDLTTTVLSGSARPLTEGQEDNLSDKLHQRMKRSW
VWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQR
LDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVASVPEMSPVG
TSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSRTGLIRTALMNMDREAKEYYEVI
IQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPISSTVGRVVAKDL
DEGINAEMKYSLVDGDGLDVFDINTDPNYQVGIITVRKPLSFESKKSYTLKVEGANPHLE
MRFLNLGPFRDTTTVHISVEDVDEPPVFDPNFYFVEVPEDVAIGTTIQIISAKDPDVTNN
SIRYSIDRSSDPGRFFYVDITSGALMTARPLDREDISWHNITVLAVELNNPSQVGSVSVT
VKVLDVNDNAPEFARFYEAFVCENAKAGQLIQTVSAIDKDDPQEGQHFYYSLAPEAANNP
NFTLRDNQDNTAWILTRRSGFRQHEQNIFYLPILISDNGRPVLSSTGTLTVHVCSCDEDG
MVMSCNVEAYVLPVSLSRGALIAILACIFVLLVLVLLILSMRRQRKQPYIIDEEENIHEN
IVRYDDEGGGEEDTEAFDIAAMWNPREAQLVVKNRQDMLPEIESLSRYVPQACVMDNNVH
NYVLAKLYEADMDLWAPPFDSLQTYMFEGNGSVAESLSSLQSVTTDSDQSYDYLTDWGPR
FKKLAEMYGATDSSGALW
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttcaggtagaatgagcaatgcaaagaacttgcttggacttggcgtgtccttg
tatttttggggactgatggatcttactacaactgtgctgtccggaagtgccagaccactc
actgaaggacaagaagacaacctgtcggacaagctacatcagcggatgaaacggagctgg
gtgtggaaccagttctttgttctggaggagtacacaggaactgatcctctctacgttggg
aagctccactctgacatggacagaggtgatggttcaatcaaatacatcctctcaggagag
ggagctggaattgtgtttacaattgatgatactactggggacattcatgccattcagcga
ttggaccgggaagaaaggtcacagtacaccctgagggcacaggctctggacaggcgaacg
ggacggccaatggaaccagagtcagagttcatcatcaaaattcaagacatcaatgacaat
gaacccaagttcctggatggaccttatgtagcctctgttccagaaatgtcacctgtgggc
acctctgttatccaggtgacagcaacagatgctgatgacccaacctatgggaacagtgca
agagtagtgtacagcattctccaaggacaaccatatttctctgtggactctcgaacaggc
ttaattagaacagctctaatgaacatggacagagaagcaaaagaatattatgaagtgatt
atccaggccaaggatatgggtggacagctgggaggattagctggaacaaccacagtcaac
atcaccctctctgatgtcaatgacaatccacccagatttccacagaagcattatcagatg
agtgtgctggagtctgctcccatcagctccactgtaggccgtgtggttgctaaagacctg
gacgaaggcattaatgcggagatgaaatacagccttgtggatggagatggattggatgtc
tttgatattaacactgatcctaattaccaagttggcatcataactgtgagaaagccttta
agttttgagagcaagaaaagctacaccttgaaagtagagggtgccaacccccacctggaa
atgcgattcctgaacctgggtcccttccgtgacaccaccactgtccacatcagtgtggag
gatgtggatgaacctcctgtgtttgaccccaacttctactttgtggaagtgcctgaggac
gtggcaattggaaccaccatacagatcatttctgccaaggacccagatgtgaccaataac
tccatcagatactcgattgacaggagcagtgatccaggacggttcttttatgttgacatt
acatcaggagcactgatgactgcaaggcctcttgaccgggaggacatttcttggcacaac
atcactgtgctggctgtggagctgaacaacccctcgcaggtgggcagcgtctcagtgaca
gtgaaagtcttggatgtgaatgacaatgcaccggagtttgcaaggttttatgaagcattt
gtttgtgaaaacgccaaagcagggcagctgatccagacagtgagtgccatcgacaaggat
gacccacaggagggtcagcacttctactacagcctggctccggaggcagccaacaacccc
aactttactctaagggacaatcaagacaatacagcgtggattttgacaaggcgctctggc
ttcagacaacatgagcagaacatattttacctccccattctgatcagtgacaatggtcgc
cccgtgctgagtagtacaggcacgctgaccgtgcatgtgtgcagctgcgatgaagacggc
atggtgatgtcctgcaatgtggaggcctacgtcctccctgtcagcctgagcaggggggca
ctcattgcaatcctcgcctgcatctttgtcctgctagtgctcgtgctcctcatcctatcc
atgcggcgccagcggaagcagccatacatcatcgatgaggaggagaacatccacgagaac
atcgtcaggtatgatgacgagggcggcggggaggaggacacagaggcctttgatattgct
gccatgtggaacccacgggaggcccagctggtggtgaaaaatcgtcaggacatgctccct
gaaatagagagcctgtcccgatacgtgcctcaggcatgcgtcatggacaacaacgtccac
aactacgtgcttgccaaactgtatgaggctgacatggacctgtgggcacctcccttcgac
tccctccagacgtacatgtttgaagggaacggctcagtggcagagtccctcagctcccta
cagtcggtgacaacagactcagaccagagctacgactacctgacggactgggggccacgc
ttcaaaaagctggctgagatgtacggtgccacagacagcagtggggctctgtggtaa
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