Cuculus canorus (common cuckoo): 104066787
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Entry
104066787 CDS
T08597
Symbol
SPTAN1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04210
Apoptosis
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104066787 (SPTAN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104066787 (SPTAN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104066787 (SPTAN1)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104066787 (SPTAN1)
Intermediate filaments
Intermediate filament-binding proteins
104066787 (SPTAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Vip3A_N
Motif
Other DBs
NCBI-GeneID:
104066787
NCBI-ProteinID:
XP_053940430
LinkDB
All DBs
Position
19:complement(6462763..6513858)
Genome browser
AA seq
2510 aa
AA seq
DB search
MLSSFRKVKVQKMDPSGVKVLETAEDIQERRQQVLDRYHRFKELSSLRRQKLEDSYRFQF
FQRDADELEKWIQEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANSGAIVKLDETGNQ
MINEGHFASETIRTRLQELHRLWELLLEKMREKGVKLLQAQKLVQYLRECEDVLDWINDK
EAIVTSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAGKLIQEQHPEEELIKS
KQDEVNASWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKGQLMASDDFGRDLA
SVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPINASQIQVKREELIANWEQIRT
LAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKG
EIDAHEDSFKSADESGQALLGAGHYASDEVKEKLTILSDERTALLELWELRRQQYEQCMD
LQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDE
FATKLIQNNHYAMDDVATRRDALLSRRNALHERAMYRRAQLADSFHLQQFFRDSDELKSW
VNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYASDE
VATRMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGK
DLTSVQNLQKKHALLEADVAAHQDRIDGITIQARQFQDAGHFDADNIKKKQEALVARYEA
LKDPMVARKQKLADSLRLQQLFRDIEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQA
LQAEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKIKLNELNQKWDSLKAKASQRRQDLED
SLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQA
LREQAQSCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE
VNDRQGFVPAAYVKKLDPAQSASRENLLEEQGSIALRQEQIDNQTLITKEVGSVSLRMKQ
VEELYHSLLELGEKRKGMLEKSCKKFMLFREANELQQWINEKEAALTNEEVGADLEQVEV
LQKKFDDFQKDLKANESRLKDINKVANDLESEGLMADEVQAVQQQEVYGMMPRDETDSKT
ASPWKSARMMVHTVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEW
IEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAE
DLQEKCTELNQAWNSLGKRADQRKEKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELA
KDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERA
DLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHE
DFDKAINVQEEKIAVLQSFADQLISADHYAKGVIANRRNEVLDRWLRLKAQMIEKRSKLG
ESQTLQQFSRDVDEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANA
DRIRGVIDMGNSLIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNF
NTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADS
LMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEK
KLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQ
RLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLA
AIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVESITARMKGLRGKVSDLEK
AAAQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDA
GLQAFQQEGIANITALKDQLLAAKHIQSKAIEARHASLMKRWNQLLANSAARKKKLLEAQ
EHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSA
QADFNQLAELDRQIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEEN
DKLRQEFAQHANAFHQWIQETRTYLLDGIAYRRVIRVYQYEVGDDLSGRSCMVEESGTLE
SQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGM
RMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMV
EEGEPDPEFESILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKP
YVTKEELYQNLTREQADYCISHMKPYMDGKGRELPSAYDYIEFTRSLFVN
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtcatttcgtaaagtcaaagtccagaaaatggatccaagtggtgtaaaagtg
ttggaaacagcagaagacatccaagaaaggcgtcaacaagttttggaccgttaccacagg
ttcaaggaactgtcttctctaaggcgccaaaaacttgaagattcctatcgattccagttt
ttccagcgtgatgcagatgagcttgaaaaatggatccaagagaaactgcagattgcatct
gacgaaaactacaaagacccaagtaacttacaggggaagctgcagaagcaccaggccttt
gaagctgaggtgcaggccaattcaggggctatcgttaaactggacgagactggaaatcag
atgattaatgaaggccattttgcatctgaaaccataagaactcggctgcaagaactgcac
cgactatgggagttactgttggaaaagatgagagagaagggagtcaaactgttgcaagcg
cagaagctggtgcaatatttacgggaatgtgaagatgtcttggactggatcaatgacaag
gaggcaatcgtgacgtcagaagagctcggacaggacttggaacacgtagaggttttgcaa
aagaagtttgaagagttccagacagacctcgcagctcatgaggaaagagtaaatgaagtg
aaccagtttgctggcaaacttatccaggaacaacaccccgaagaggaactgataaagtcc
aaacaggatgaagtcaatgcaagctggcagcggctcaaggggctcgcccttcagaggcaa
ggaaaactctttggggcagctgaagtccagcgcttcaacagggatgtggatgaaacaatc
agctggattaaggagaaagggcagttgatggcctcagacgattttggcagagacttggcc
agtgtgcaggctttattgcgtaagcatgaaggcctggaaagagatcttgcagctctggaa
gataaggttaaggccctttgtgcagaagctgaccgcttgcagcagtctcatccaataaat
gcttctcaaattcaagtgaaacgggaggagctgattgctaactgggaacagatccggact
ctggcagcagagaggcatgctcgccttaatgactcctacaggctgcagcgctttcttgcg
gacttccgagatctcaccagctgggtgactgagatgaaggctctgataaatgctgatgaa
cttgccaatgacgtggctggagcagaagcccttctagataggcatcaggaacataaggga
gaaattgatgcccatgaagatagcttcaaatctgctgatgagtctgggcaggctctgctt
ggtgctgggcactacgcttctgatgaagttaaagaaaagctgaccatcctctcagatgaa
agaactgccttgctagaactatgggaacttcgcagacagcagtatgagcagtgcatggac
ctgcagcttttctacagagatactgaacaagttgacaactggatgagcaaacaagaagca
tttctgctgaatgaagaccttggcgattctctggatagtgtggaagctcttctcaagaag
catgaagactttgagaaatccctaagcgcccaggaggagaaaatcacagcattagatgag
tttgctactaaattgattcagaataaccactatgccatggatgatgttgctacacgcaga
gatgctctgctgagccgccgaaatgcccttcatgaaagagctatgtatcgtcgtgcccag
ctggccgattctttccatctgcagcagtttttccgagactctgatgagctaaagagttgg
gttaatgaaaaaatgaaaactgcaacagatgaggcatacaaggatccatcaaacttgcaa
ggcaaagttcagaaacatcaagcttttgaagcagagctttctgctaatcagagtcgtatt
gatgcgctggagaaagctggccagaagctgattgatgtcaaccactatgcatctgatgaa
gtggcaacccgcatgaatgaagttatcagcttgtggaagaaacttctggaggccactgag
ctcaaaggtataaaactgcgtgaagccaatcaacagcagcaattcaatcgcaacgtggag
gacattgagctgtggctttatgaagtggagggacacttggcttctgatgattatggaaaa
gaccttactagtgttcagaatctccagaagaaacatgccctgctagaggcagatgttgct
gcccatcaggatcgaatagatggcattaccatccaggcacgccagttccaagatgctggg
cactttgacgctgacaatatcaagaagaaacaagaagctttagtagctcgttatgaagct
ctaaaggatcctatggtagctcgtaagcagaaacttgcagattctcttcgcctgcagcag
cttttccgtgacattgaggatgaagagacctggattagggaaaaagaacctattgcagca
tcaacaaaccgaggcaaggacttaattggtgtccagaatctgctaaagaagcaccaggct
ttgcaggcagaaattgcaggccatgagccccgcattaaagcagtcacacagaaaggaaac
gctatggtggaggagggacattttgcagctgaggatgtgaaaatcaaattgaatgagttg
aaccaaaaatgggactctctgaaagctaaagcatctcagcgtcgacaagacctagaggat
tccctgcaagctcagcagtattttgctgacgctaatgaggcggaatcctggatgagggag
aaggaacccattgttggcagtacagactatggaaaagatgaagactctgctgaggctctt
ctgaagaaacatgaagctttgatgtctgatctttctgcttacggcagtagcatacaggca
ttaagggaacaggcccagtcatgcaggcaacaagttgctcccacagatgatgaaactgga
aaagagctcgttctggcactctatgattaccaagagaagagtccccgggaggtgactatg
aaaaagggggacatcctcactttactcaacagcaccaacaaggactggtggaaggttgaa
gttaatgatcgtcagggctttgtaccagctgcctatgtcaaaaagctagatcctgcccag
tctgcatcccgagagaatctcctggaagagcaaggcagcatagcgttgcgacaggagcaa
attgacaaccagactctcataactaaggaggtcggcagtgtatctctgcgtatgaaacag
gtcgaagaactgtatcactctcttttggagctgggagaaaaacgtaaaggcatgctggaa
aagagctgcaaaaagtttatgcttttccgtgaagctaatgagcttcagcagtggatcaat
gagaaggaagcagcgctcacaaatgaggaagtgggtgccgatctggagcaggtggaggtg
ctacagaagaaatttgatgattttcagaaggacttaaaggccaatgagtcacgtctgaag
gacataaacaaggttgcaaatgacctggaatcagaagggttgatggcagatgaagtgcaa
gcagtacagcaacaggaagtctatggcatgatgcctagggatgaaactgattctaagaca
gcctctccttggaagtctgcacgtatgatggtgcacacagtggcgacctttaactcaatc
aaggaattgaatgaacgctggaggtctctgcagcagttggcagaggagcgaagccagctg
ttgggcagtgcccatgaagtccagagattccacagagatgctgatgaaacaaaagaatgg
atagaggagaagaatcaagcattaaatacagacaactatggacacgacttggccagtgtg
caggctttgcagcgcaaacacgaaggctttgaaagggacttggcagctcttggagacaag
gtgaactctcttggtgaaactgcccagcgtctgatccagtctcatccagagtctgctgaa
gatctccaagaaaaatgtactgagcttaatcaggcttggaacagcctgggaaaacgtgct
gatcagcgcaaagagaagcttggagactctcatgacctgcagcgtttcctcagcgacttc
agggaccttatgtcttggatcaatggaattcgcggcctggtctcctctgatgaacttgca
aaggatgtgactggagctgaagctttgttggaaaggcatcaggaacaccgcactgaaata
gatgcgagggctggcactttccaggcatttgaacaatttggtcaacagcttctggctcac
ggacactatgccagcccagagatcaaggagaaactggatattctggatcaagaacgggca
gacctagaaaaggcatgggtccagcgcaggatgatgctagaccagtgcttagaactacag
ctgtttcatcgggactgtgaacaagctgagaactggatggctgcccgagaggccttcctg
aatacagaggataaaggagattcattagacagtgtggaggcactcatcaagaaacatgaa
gattttgataaagcaatcaatgtccaggaggagaaaattgctgtcctgcagtcttttgcc
gaccagctgatctctgctgatcactatgcaaaaggtgtcatcgctaacagacgcaacgag
gttctggacaggtggctccgtctgaaagctcagatgattgaaaagagatcgaagctagga
gaatcacagacactccagcagttcagtcgtgatgtggatgaaatagaagcttggatcagt
gaaaaactacagactgcaagtgatgagtcatataaggatcccacaaatatccagctttcc
aaactgctgagcaaacaccagaagcaccaagcctttgaagcggagctccatgccaacgca
gatcggatccgtggagtcatcgatatggggaactctctgattgagaggggggcgtgtgct
ggcagtgaggatgctgtgaaggcacgcctggctgccctggctgaccagtggcaattcctg
gtacagaaatcagcggagaagagtcagaaactgaaagaagctaataagcaacagaatttc
aatactggaatcaaggactttgatttctggctttcagaggtggaggctttgttggcatct
gaagactatgggaaggacttggcatcagttaacaaccttctgaagaaacaccagttactg
gaagctgatatttctgctcatgaggatcgtctgaaggacctgaacagtcaggccgacagt
ttgatgaccagcagtgcttttgatacatcccaggtgaaggataaacgtgagactattaat
ggacgctttcagaggattaagagtatggcagctgcccgacgtgcaaagctgaacgagtcc
caccgcttgcatcagtttttccgtgacatggatgatgaggagtcctggatcaaagagaag
aagctgttggttagctctgaggactatggcagagaccttactggtgtgcagaaccttagg
aaaaagcacaagcgcttagaagcagaattggctgcccatgaacctgctatccagggtgtt
ctggacactggtaagaagctttcggatgataacacgattgggaaggaggagatacagcag
agactggctcagtttgtggatcactggaaagagttaaagcagttggcagctgcgaggggt
cagcgtctagaggagtccctggagtaccagcagtttgtagcaaatgttgaggaagaagaa
gcctggatcaatgagaagatgacattggtagccagcgaagattatggggacacccttgct
gctatccagggcttgctgaaaaagcatgaagcattcgagacagattttactgtccacaaa
gacagagtgaacgatgtttgtgctaatggagaggatctcattaaaaagaacaatcaccac
gtggagagtattactgccaggatgaagggcctcaggggcaaggtgtcagatctggagaaa
gcagcagctcagaggaaagccaaattggatgagaactctgccttccttcagttcaactgg
aaagcggatgtagtggagtcatggataggtgaaaaggagaacagtctgaagactgatgat
tatggacgtgacctctcttcagtgcaaacactactcaccaaacaggaaacatttgatgct
ggacttcaggctttccagcaggagggaattgcaaacatcactgctttgaaagaccagctc
ctagcagccaagcacatccagtcaaaggccatcgaggctcggcatgcttccttgatgaaa
cgctggaatcagctgcttgcaaattctgctgccaggaaaaagaaactcttggaggctcag
gagcatttcagaaaggttgaggatctgttcctgacttttgcaaagaaggcatctgccttt
aacagttggtttgagaacgctgaagaggacctgacagatcctgtgcgctgtaactcgctg
gaagagatcaaagcactgcgagaagctcatgatgctttccgttcttcacttagttctgcc
caagctgacttcaaccagctggcagagcttgatcgccagatcaagagcttccgcgtagcc
tccaacccctacacttggttcactatggaggctcttgaggaaacctggaggaatctgcag
aaaattatcaaggaacgtgaactggagctgcagaaggagcagcgaaggcaggaagaaaac
gacaaactgcgccaggaatttgctcagcatgctaatgctttccatcagtggattcaggag
accaggacttacctgctagatggcatagcgtaccgtcgtgtcattcgtgtctatcagtat
gaagttggggatgatctatctggaaggtcttgtatggtggaggaatcgggaacgctggaa
tcgcagctggaagctactaaacgcaaacaccaggagatccgagctatgaggagccagctg
aagaagattgaggaccttggggcagccatggaagaggcccttatcttggacaacaaatac
acagaacacagcactgtggggctggcgcagcagtgggaccagctcgaccagctggggatg
aggatgcagcacaacctggagcagcagatccaggctcgaaacacgaccggagtcaccgag
gaggcgctgaaggaattcagcatgatgttcaagcacttcgacaaggacaaatctggacga
ctgaaccaccaggagttcaagtcttgcttgcgctccctgggctatgacctgcccatggtt
gaggaaggagagcccgacccagagttcgagtccattcttgacaccgtagatcccaacagg
gatggacacgtctcgctgcaggagtacatggcattcatgatcagccgggaaacagagaat
gtgaaatccagtgaggagatcgagagcgctttccgtgccctcagctccgaggggaagccc
tatgtgaccaaggaggagctctaccagaacctgacccgggaacaggccgactactgcatt
tctcacatgaagccgtatatggacggcaagggcagagagcttccttctgcttacgactac
atcgaattcacacgttccctctttgtgaattga
DBGET
integrated database retrieval system
