Cuculus canorus (common cuckoo): 104066806
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Entry
104066806 CDS
T08597
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104066806 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104066806 (EXOSC2)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104066806 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104066806 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
104066806
NCBI-ProteinID:
XP_009567767
UniProt:
A0A091GKF6
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Position
19:complement(5553592..5565465)
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AA seq
294 aa
AA seq
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MATISMRLPVARKPVGPSASRGGEKHLVAPGDTITTDTGYMRGHGTYLEDEKLIASVAGA
VERVNKLVCVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGE
LRRRSAEDELAMRDYLQEGDLISAEVQSIFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDEEAGGFTTNLEPVPLSDREVISRLRN
CIVALVTHKLMLFDTSILYCYEASLPHQIKDILKPEVMEEIVLETRQRLLDLEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgattagcatgaggctgccggtggctcgaaagcccgtggggccaagcgcgtcc
cggggcggcgagaagcacctggtggcgccgggggacacgatcaccaccgacacgggatac
atgaggggccatggcacctacttggaggacgagaagctcatcgcctcggtggccggcgct
gtggagagggtcaacaagctggtgtgcgtcaaagcgctgaagacaaggtacaatggtgaa
gttggcgacattgttgtggggaggattacggaggttcaacagaagcgatggaaggtggaa
accaattccaggcttgattcagtcttgttgctgtcatctatgaatttacctggtggcgaa
ctgagaaggagatcagcagaagacgagcttgccatgagggactatctgcaggaaggggac
ctcatcagtgcagaggtccagtccatattttctgatggggctgtgtcactgcacacccgg
agtctgaaatacgggaagcttggccagggtgtgctcgtccaggtctcaccctcccttgtg
aaacgccagaagactcacttccatgacttgccctgtggtgcatctgtgatcctcggcaac
aatggtttcatctggatctacccaactccagagcagaaagatgaagaggcaggaggcttc
accaccaacttggagccagttcccttatctgaccgggaggtgatctcgcggctccgaaac
tgcattgtggctctggttactcacaagttgatgctctttgacaccagcatcctgtattgc
tatgaagcttcccttcctcatcagatcaaggacattctcaaaccagaggtgatggaggag
attgttctggaaacccgacagagactgctggatctggagggataa
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