Cuculus canorus (common cuckoo): 104066818
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Entry
104066818 CDS
T08597
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104066818 (TTF1)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
104066818 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Poxvirus_B22R_N
Motif
Other DBs
NCBI-GeneID:
104066818
NCBI-ProteinID:
XP_009567783
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All DBs
Position
19:4875581..4886021
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AA seq
716 aa
AA seq
DB search
MTEKASADDFQVQDFVKKKKKKRKHKGYHKKHEDYERESVQNAEVSQASPVIFEDQAAQN
GGSRKKKKTKNHEEEKEQSLLDNWCVTLEHETGDDTGVDAFQKKKKKKRKYNESADDQTD
VTYVSVNQQNSGSCQEGDADYVFLKQPAKKKKKEKLPEEDEVCEPPVLETDDKNDNKRLK
KKKKKRRSCTQEMQEDTDVTVDQSPLSSPERNRQREEDTASPLPPEEDEVATPQTCPDDG
DCDISAMSEDSADEHANSSKTANRPQKTPVRTRKTIKSSVYVREETSSESEEMTPEPSAS
NTKDQNSSFAGMAASDELNLDDEDYLDAVTGLVVDLETAKQELEEFIPHVRTMSDSSVRK
MAGRDLTRFKQFKKQGIAVKFGRFSQKENDQVRKNVEEFLSITAIDSAEKLLFTSRYPEE
KETISRLKAEYRFCEKLSEGIPRPWRLIYYRARKMFDPHNYKGRYTEEEKEKLKRYHALH
GNDWKKISEMMSRSNLSVAMKYSEIKSAINYGPWSKEETQKLMHAVEEVFRKRMEVDENS
LSSSEKSHRDLSIDREKLYQKLPWTEIEAKVGTRYWRQCKQKWTTILTNKMTKGQQLYMG
VKGLQAKINLIKRLYEMKVEDPNEVNWEELSNTIGDVPRGYVQAKFYKLKVTSVPFWQKK
TFSEIVDYLFEEKLPELEEKLAKKKMKHLSSDNSTATQQRKTFRLSDIFDTSEESD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaagcaagtgcagatgattttcaagttcaggattttgtcaagaagaagaag
aagaagagaaaacacaaaggataccataagaaacatgaagattatgaaagagaaagtgta
caaaatgcagaggttagccaggcttctccagtgatatttgaagatcaagcagcacagaat
ggtggaagccgtaaaaagaagaaaacaaagaatcacgaggaggaaaaggaacagtctttg
ttagataattggtgtgtaacactggaacatgaaactggtgatgatactggtgtggatgct
ttccaaaagaaaaagaaaaaaaagcggaaatacaatgagagtgcagatgatcaaaccgat
gtaacttatgtctcagtaaatcagcagaactctggtagttgtcaggagggtgatgctgat
tatgtttttttaaaacaacctgctaagaagaaaaaaaaagaaaaattgcctgaagaggat
gaggtatgtgagccgcctgtcttagaaacagatgacaaaaatgacaataaaaggttgaaa
aagaagaagaagaaaagacgtagttgtacccaagaaatgcaagaagacacggacgtaacc
gttgaccagtcgccgttgtcatctccagagaggaacaggcaaagggaagaagacacagcc
tcgccattacctccagaagaggatgaggtggcaacaccccagacgtgccctgatgatggg
gactgtgatatttctgccatgagtgaagattctgcggatgaacatgctaattcttctaag
acagccaatcgacctcaaaaaactccagtgcgcactagaaagacaataaaaagcagtgtt
tatgtcagggaagaaacctcttccgaatctgaagaaatgacaccagaaccctcggcatcg
aatacaaaggaccagaacagttcttttgctggaatggcagcctccgatgagcttaatctg
gatgacgaagactacctggacgctgtcacaggtttagttgtggatttggagaccgcgaaa
caagaattggaagagtttattcctcatgtgaggaccatgtcagacagttcagtcagaaag
atggctggaagagacttaacgaggtttaaacagtttaaaaaacaaggtattgctgtcaag
tttggcagattttcgcagaaagaaaatgatcaagtccgtaaaaatgttgaagagttctta
tcaattaccgcaatagacagtgctgaaaaactcctgttcacctcgaggtatccagaagaa
aaagaaactatcagtcgcctgaaagcagaatatcgtttttgtgaaaaactttctgagggc
ataccgcgaccctggaggctgatatattatcgagcaaggaaaatgttcgacccacataat
tataaggggaggtatactgaggaagaaaaagaaaaattaaagaggtatcatgctctgcat
ggcaatgattggaagaagatttccgagatgatgtcccgttctaacctctcagttgccatg
aaatactccgaaatcaagtcagctattaattatggtccttggtcaaaggaagagacccag
aagttaatgcatgctgtggaggaggtgtttaggaaaagaatggaagtggatgaaaattct
ctttcatcatcggaaaagtcacatcgagatctctcgattgaccgagagaaactgtaccag
aaattaccatggactgagattgaagctaaagtgggaactcgatattggagacaatgtaaa
cagaaatggactacgattttgacaaacaagatgaccaaagggcaacagctctatatgggc
gtcaaaggattacaggccaagatcaatcttattaaaagattatatgaaatgaaagtggaa
gatcctaatgaagtaaactgggaagaactcagtaatactattggagatgtccctagaggc
tatgttcaagcaaaattttataagctgaaagtcacctctgtccctttttggcaaaaaaag
actttttctgaaattgttgattatctttttgaagagaaacttccagaacttgaagaaaag
ttagcaaaaaagaagatgaaacaccttagttctgacaattcaacagccacccaacagagg
aagaccttccgactcagtgacatttttgacaccagtgaagagagtgattaa
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