Cuculus canorus (common cuckoo): 104066866
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Entry
104066866 CDS
T08597
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X3
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104066866 (GAPVD1)
Membrane trafficking [BR:
cuca04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104066866 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
104066866
NCBI-ProteinID:
XP_009567841
LinkDB
All DBs
Position
19:complement(952410..982585)
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AA seq
1461 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQESAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPIQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLVCFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRMKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEGLSRTVVYMTYSQLTTLVGF
MRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRSRSNILTDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQL
GDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAV
VRPKVHYARPSHPPPDPPILEGAMGGNEARLPNFGSHSLIPTDLEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPGWKRCPGNEERELPMPTTSTGAAVLVAASQSSSSSPSKDSSRGE
IEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDMVPDRYPTLQDDPS
PRLSAQAQAAEDILDKYRNAIKRTSPSEGALVNYDGAEAIGDGESMHDSPRDEALQNMSA
DDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNE
IVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYL
TRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTA
ADDKTAQVEDFLQFLYGAMAQDTIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGD
ILRDQLLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCI
LRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEE
SYWWMQFTAAVEFIKTIDDRK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggacatacacacgctggctcatcacctcaagcaggagcgactgtatgtg
aactcagaaaagcagctcatccagaggctcaatgcagatgtattgaagacagctgagaag
ctgtaccgcacagcatggatctccaagcagcaaaggattaacctggacagactgatcatc
acaagtgctgaagcttctcctgctgagtgttgccagcatgctaagatcttggaggatacg
cagtttgtggatgggtacaagcagctgggatttcaggagtctgcttacggagaattcctc
aacaggctgagagaaaatcctaggcttattgcatcctgtctggttgccggagagaagctc
aaccaggacaacactcagagtgtcattcacactgtcttcacctccatttacggcaattgc
atcatgcaggaggatgagagctacctccttcaggtcctccgttatctaatagagtttgag
ctcaaggaaagtgacaacccaaggcggctgctgagacgaggcacctgtgcattcagcatc
ctattcaaacttttctctgaaggactcttttctgcaaagctttttcttacagcgacctta
cacgagcccatcatgcagcttctggttgaagatgaagaccacctggaaactgacccaaac
aaattaattgagagattctcccccatacaacaggaaaagctatttggagagaagggcaca
gagaagttcaagcagagagtccaagagatggtcgactccaatgaggccaagctggtggcc
ttggtgaacaagttcattggctatctcaaacaaaacacttactgttttcctcacagcttg
aggtggattgtgtcacagatgtacaaaacgctctcgtgtgtggacaggttggaggtgggg
gaggtcagagcaatgtgcacggatcttctgctggtgtgtttcatctgtcctgccatcgtt
aaccctgaacagtatgggatcatttccgacgctcctataaacgaggtggcaagatttaat
ctcatgcaggttggaaggctcctgcagcagttggcgatgacaggttctgaagagggggat
ccgcggatgaagagcaaccttgcaaaatttgacaaaagctgtgtggctgctttcctggat
gtggttattgatgggcgcgccgttgaaactcctccaatgtcatctgttaacctgctggag
gggctgagtagaacagtggtttacatgacctacagccagctgaccactctggttggcttt
atgcggaatgtaatgtcaagtgatcaacttaaggaagaccggatggctttggaaaacttg
ctggcaaacttaccccagaacaaaccagggaagagcagcagccttgaaatgactccatac
aataccccacaactctctcctgcaactactccagctaacaaaaaaaatcgactaccgata
gccactcgcagcagaagcagatcaaatattctaacggatcagcacggagatcatgaagga
tcctcccaggagacaatcccagaagttcagccagaggaggtgctggtcatttctctgggg
acaggtccacagattactccaggaatgatgtcagaaaatgaggtcttaaatatgcagctt
ggagatggtggacaaggagatgtccctgttgatgaaaacaaactgcatggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggcatatctgaaggtccttcc
aatcgctccaactctgtgtcgtctttggacttagaaggggagtctgtgtcagagcttggc
gcaggcccctctggcagcaatggcgttgaagctctgcagctgctggagcacgaacaagcc
acaactcaggataatcttgatgacaagctccgtaaatttgaaatccgtgacatgatgggg
ttgactgatgacagagatatatcagaaactgtgagtgaaacttggagcacagatgtcttg
ggaagtgactttgatccaaatattgatgaagatcgtttgcaagaaatagcaggcgcagct
gcagagaacatgctgggcagcttgctgtgcctgccgggttcaggatctgtgctgcttgat
ccctgcacaggttcaaccatatcagaaaccacaagtgaggcatggagtgtggaagtattg
ccgagtgattcagaggccccagacttaaaacaagaggaaagactacaagaactggagagc
tgctctgggctgggcagcacgtctgacgacacagatgtaagggaggtcagttctcgaccc
agtacaccaggcctcagcgtcgtatcaggtattagtgcaacatctgaggatattcctaac
aaaattgaggatctcaggtccgaatgcagctctgactttgggggaaaagattctgtgacc
agtcctgatatggacgaaacggcccatggagccagtcagttgacatctcctccttcgcag
acagattctttgcttgcattgtttgaccctctgtcatcaaatgagggggtatcggctgta
gtaaggcctaaagtacactatgcaagaccctctcacccgccaccagatcctccgatcctg
gaaggagctatgggaggtaatgaggcccgattgccaaactttgggtctcacagcttaatt
ccaactgatttagaagcgttcaagcagaggcattcctatccagagaggctagtccgcagc
aggagctcagatatagtgtcatcagttcggagacctatgagtgatcctgggtggaaaaga
tgtcctggtaatgaagagagggagctgcctatgccgaccaccagcactggagcagccgtt
ctggtggctgcatctcagtcatcgtcttcgtctcccagtaaagactcctctaggggagag
atcgaagaacgaaaagacagcgatgatgagaagtcagacagaaacaagccctggtggaga
aaacgttttgtgtctgcaatgcccaaagctccaattccctttagaaagaaagaaaaacaa
gaaaaagacaaagatgacatggtgcctgacagatacccaacacttcaagatgatcccagc
ccgaggctcagtgcgcaggcgcaagctgcagaggacattctggacaaatacaggaatgca
attaagcgaaccagtcctagtgaaggagctctagtaaactatgatggcgcagaggctatt
ggggatggtgaaagtatgcacgactctccacgtgatgaagctttgcaaaatatgtctgca
gatgatctcccagactctgcaagtcaagtagcacagccacaaagttctgctttctcctat
agggatgcaaagaagaaattgagattggctctttgttcagcagattctgttgcctttccg
atgttgacacattcaacaaggaatggtctgccagaccacacagacccggaagataatgaa
attgtgtgcttcttgaaagttcagctggctgaagccattaacctccaagacaagaacctg
atggcccagctgcaggagacaatgcgatgtgtaagccgctttgataacagaacctgtcga
aagctgctggcatctattgcagaggactataggaaaagagctccatatatcgcttattta
actcgatgtcgccaaggcctgcagacgacacaggcgcacttggaaaggctgttgcaaaga
gttctgcgagataaagaagtggccaacagatacttcacgacagtatgtgtgaggctactg
ttagagagcaaagaaaagaaaataagggagtttattcaagacttccagaaactcacagca
gcagatgataaaacagcccaagtggaggattttctgcagttcttgtatggggcaatggct
caggacaccatctggcagaatgccagcgaagaacagctccaggatgcacagttggctata
gaacgcagtgtcatgaatcggattttcaaactggcgttttaccctaatcaggatggagat
attttgcgtgaccagctccttcacgagcacatacagaggttatcgaaagtagtgactgcg
aaccacaaagcactccagatacctgaggtatatctcagggaggcaccgtggccatctgca
cagtctgaaatccgcacaataagtgcttataaaaccccccgagacaaagtgcagtgtatc
ctgcgaatgtgctcaaccatcatgaacttgctcagtctggcaaatgaagattcggtacct
ggggcagatgattttgtgcctgttttggtctttgtcctcataaaggcaaacccaccttgc
ttgctatccaccgttcagtacattagtagtttctatgccaactgtttatctggagaagaa
tcgtactggtggatgcagtttacggcagcggttgaattcattaaaactattgacgatcgc
aagtaa
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