Cuculus canorus (common cuckoo): 104066929
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Entry
104066929 CDS
T08597
Symbol
TSC1
Name
(RefSeq) hamartin isoform X1
KO
K07206
tuberous sclerosis 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04140
Autophagy - animal
cuca04150
mTOR signaling pathway
cuca04218
Cellular senescence
cuca04910
Insulin signaling pathway
cuca05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104066929 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104066929 (TSC1)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
104066929
NCBI-ProteinID:
XP_053940500
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Position
19:4624781..4653672
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AA seq
1157 aa
AA seq
DB search
MAQQGNVGELLPMLDSPILGVLEDITAAFKDNLICDRGPMLVNNLVDYYLETNSQQALHI
LSTLQEPHDKHLLDKINEYMGKAATRLPTLSLLGHVIRRQPSWKHKLSQAPLLLSLLKCL
KTDTDVVVLTTGVLVLITMLPMIPQSGKQYLHDFFGIFGRLSAWCLQNPGHVAEIYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLETFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHDVVIECAKISLDPAEASYEDGYYPVSRKLCTSLKHHQTDPSASYYID
THNSYGTSTPYSTPRLTLSQMPGQLPQILSPQSILLSTEPQQVTIWSPSAVCGMTTPPTS
PGIVPSESSQSASQPYSKAFGTSAGGKGTPLGTPATSPPPPCTSDDFVHVSLPSAAAMPP
KKEDKPDPGRPLLYRQQNVINSDKSLDAASSKSSVTLSDLQEFLGGLSFEDSAEKDREED
AISKEISEITTDAEHMVPRGGFDSPFYRTNESLSSSQKKTHSAVSGVQGHSQTSEPLTSS
LDKPGPESARETPKQTFTPIDKPCGGSGESPAGNREGTSGEASILTPSPCKVPAQRRVVF
GSGQPPLYDHLFEVALPKTAYLFVGKKTEELLKKAKGTQDDDCMCSTSPVEVLDRLIQQG
ADAHTKELNKLSLPSKSADWTHFGGSPPSDEIHTLRNQLLLLHNQLLYERFKRQQHALRN
RRLLRKVIKATALEEHNAAMKDQLKLQEKEIQALKLSLQKEQARYRQFQQEHENIVAQLH
SQIRQLQHDREEFYNQSQELQTKLEDCRNMIADLRLELKKANNKVCHTELLLSQVSQKLS
NSESVQQQMEFLNRQLLVLGEVNELYLEQLQHKHTDTTKEVEMLHAAFRKELEKAKLCVQ
QQSQSLDASQKRIAELESQLAKKDHLFLEQKKYLEDVKIQARGQLQAVESRYKAQKRITQ
AFELEILDLFGRLEKSSLLKKLEDEKTEAAEAAEERLDCGNEDTVAGYSEETIGRNGETK
PPSTRVNSSSKGGSSSELSTPEKNQNQRFSSRWETSLLLEPSTAVPLTVGSLPSSKSFLG
MKARELFRNKSESQCDEEGVTINRLSDALKNELCKDPGMEMKAPPSPDNLSLSPKFQESS
VGQLHIMDYNETHHDHS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaaggaaacgttggtgagctcctcccaatgctggattctccaattctgggt
gtcctggaagatataacagctgcgttcaaagataatctcatttgtgaccgtggacccatg
cttgtgaacaacctagtggactattacttggaaaccaattcccagcaggcactgcatata
ctgtccacgctgcaagagcctcatgacaagcatctactggacaaaattaatgaatacatg
ggcaaagctgctacccgtttacccactctctctttgttgggacacgtgataagacgacaa
ccatcatggaaacataaactgtctcaagcacctctcctactttcattacttaaatgtctc
aagactgacacagatgtagtagtactcacaacaggtgtcctagtgctaataaccatgttg
ccaatgattcctcagtctggcaaacagtaccttcatgatttctttggtatctttgggcgt
ctctcagcctggtgcttgcagaatccaggtcacgtggcagagatttatcttgtccatctt
catgccagtgtttatgctctctttcatcgtctttatggaatgtacccttgcaatttcgtc
tcctttctgcgctctcactacagtatgaaggaaaacttggagacctttgaagaggtagtc
aagccaatgatggaacatgtgcgaattcatccagaattagtgactggatccaaggaccat
gaactggacccacgaaggtggaaaagactagaaactcatgatgttgtgatagaatgtgcc
aaaatctccctggaccctgcagaagcctcctatgaagatggctattaccccgtgtctcgg
aaactctgcacaagcttaaaacatcatcaaactgaccccagtgccagctattacattgac
acacacaacagctatggaacttctaccccatattccactcctcggctaacactatcacaa
atgccagggcagctacctcagattttgagcccacagtcaatactgctgtcaactgagccg
cagcaggttaccatctggagtccttctgcagtttgtggtatgaccactccaccaacctcc
cctggaattgtcccatcggagtcatcccagtctgcatcacaaccttacagcaaagctttt
ggcacatctgcaggagggaagggaacacctttgggaacgccagccacatctcctcctcca
ccctgcacttcagatgactttgtgcatgtttcactcccttcagctgctgccatgcctcct
aaaaaggaggacaaaccagatcctgggaggcctttactctaccgacagcaaaatgtcata
aacagcgataaatcattggacgcagccagtagtaaaagttcagtaaccttaagtgatctt
caggagtttttaggtggtttgtcttttgaagacagtgctgaaaaggacagagaggaagat
gcgatatctaaagagatctcagagatcacaaccgatgctgaacacatggtgcctagagga
ggattcgactctccattttaccgcacaaatgaaagtctgtcaagctctcaaaagaagacc
cattcagcagtctctggtgttcagggacatagtcagacctctgagcctttaacatcttct
ctggacaagcctgggcctgagagcgcacgggaaacacccaaacaaacatttactcccata
gacaagccctgtggaggctctggtgaaagccctgctggtaacagggaaggaacctctggg
gaggcgagtattctcactcccagcccttgcaaagtaccagcacaaagaagagtggtgttt
gggagtgggcagcctcccctatatgaccacctctttgaggttgcgttaccaaagactgcc
tacctctttgttggcaagaagactgaggagctgctaaagaaagccaagggaacccaggat
gatgactgcatgtgctctacttctcccgtggaagtactggacaggctcatacagcaagga
gcggatgcacacactaaggagctgaacaagttgtctctgccaagcaaatctgctgactgg
actcactttggaggttctcccccttcagatgagattcacaccctgcgtaaccaattactt
ttgctgcacaaccagttattgtatgaacgcttcaaaagacagcaacatgcccttcggaac
cgtcgactcttgcgaaaagtgattaaagcaacagcactggaggaacataatgctgccatg
aaagatcagctgaaactacaggaaaaagaaatccaggccttgaaactgagtctgcaaaaa
gaacaggcaaggtaccgccagtttcagcaggaacacgaaaatatagtggctcagcttcac
agccagatcagacagctgcaacatgaccgtgaggaattctacaaccagagccaggaattg
cagaccaagctggaagactgccggaatatgattgcagatctgaggttagagttaaagaag
gctaacaacaaggtgtgtcacactgaattgcttcttagccaagtttctcaaaagctttcc
aacagtgaatcagtgcaacagcagatggagttcttgaacaggcaacttctggttcttgga
gaggtgaatgagttgtacctggagcagctgcagcacaagcacacagacactacaaaggag
gttgaaatgttgcatgctgcttttcggaaagaactggagaaggcaaaattgtgtgttcaa
cagcaaagccaaagccttgatgcttcccagaaacggatagctgaactggaatcgcagctt
gctaaaaaggaccatctcttcctggagcaaaagaaatacttggaagatgtcaaaatccaa
gcaagaggtcagctgcaagcagtagaaagtaggtacaaggcccagaaaagaatcacacag
gcatttgagctggagatcttggatctgtttggccgactagagaagagcagcctactgaaa
aaacttgaagatgaaaaaacagaagcagctgaagccgcagaagaaaggctggattgtggc
aatgaagatactgtggccggatacagtgaagaaacaattggtagaaatggagagaccaaa
cctcccagcactcgagttaatagtagcagtaaaggtggcagcagcagtgagctctccacc
ccagaaaaaaaccagaaccagagattcagcagtcgctgggagacatccctgttgctggag
ccctcgactgctgtcccactgactgtaggttcactccccagctccaagagcttccttgga
atgaaggcacgagaattatttcgcaacaagagcgagagccagtgtgatgaggagggtgta
accatcaacaggctttcagatgctctaaagaatgaactatgtaaagatccaggcatggag
atgaaggcccctccgagccctgataaccttagcctctcacctaagttccaggaaagcagt
gttggacagcttcatatcatggactacaatgaaactcatcatgaccacagttaa
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