Cuculus canorus (common cuckoo): 104066972
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Entry
104066972 CDS
T08597
Symbol
NR5A1
Name
(RefSeq) steroidogenic factor 1 isoform X1
KO
K08560
steroidogenic factor 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104066972 (NR5A1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cuca03310
]
104066972 (NR5A1)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
104066972 (NR5A1)
Nuclear receptors [BR:
cuca03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
104066972 (NR5A1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104066972
NCBI-ProteinID:
XP_053940322
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Position
19:1170016..1192648
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AA seq
542 aa
AA seq
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MGRRLAGVLPWAACAQPEPRHLPSGQGSHKSPIPLRTEQWCPAPRGGSLVAALNQRCEQD
CAVAAGHAAASGALEGMDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNN
KHYTCTESQNCKIDKTQRKRCPYCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRA
LKQQKKALIRANGFKLETVPQIMSPVQHDYSLSSTIHSIHTMSKTLPPNSAALTPIDYER
SPYGTPSLGMTVPSHTPLAGYHYPSFPNRTIKSEYPDHYTNTHESMPAYVYPETYPSSSP
PDIPEVILKLLQLEPDEAQVKARILACLQQEQGKGRHEKLSTFGLMCKMADQTLFAIVEW
ARSCIFFKELEVGDQMKLLQNCWSELLVFDHVYRQLQHGKEHSVLLVTGQEVDMSTVAAQ
AGSILNTLVLRAQELVLHLHSLQVDRQEFVCLKFLILFSLDVKYLENHSLAKDAQEKANA
ALLEYTVCHYPHSTDKFRQLLLRLAEVRALSMQAEEYLYHKHLSGEVPCNNLLIEMLHAK
RT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagattggctggtgtcctgccttgggcggcgtgtgctcagccagagccccga
caccttcccagcggacaagggtcccataaatcccccatcccgctgcggacggagcagtgg
tgcccagcaccccgtggtggctccttggtggcagctctcaaccagaggtgtgagcaagac
tgtgcggtcgcagcagggcacgcagctgcctcgggcgccctggaggggatggactattcc
tatgatgaggacctggacgagctgtgtccggtctgcggggacaaggtctccgggtaccac
tacgggctgctcacctgcgagagctgcaagggcttcttcaagcggacagtgcagaacaac
aagcactacacctgcacggagagccagaactgcaagatcgacaagacccagcgcaagcgc
tgcccctactgccgcttccagaagtgcctgaccgtggggatgcgcctggaagctgtgcgt
gccgaccggatgcgcggagggaggaacaagtttggacccatgtacaagcgggaccgtgcc
ttaaagcagcagaagaaagctctgatccgtgccaacggcttcaagctggagaccgtgcct
cagatcatgtccccagtgcagcacgactacagtctgtcctccaccatccacagcatccac
accatgtccaagaccttgccacccaactctgccgccctgacgcccatcgactacgagcgc
agcccctacgggacaccctctctgggaatgactgtgcccagccacacgccgcttgccggc
taccactacccttccttccccaaccgcaccatcaagtccgagtacccggaccactacaca
aacacacacgagtccatgcctgcctacgtgtacccagagacctaccccagcagctcccct
cccgacatccccgaggtcatcctgaagctgctgcagctggagcccgacgaggcccaggtg
aaggcacggattctggcctgcctgcagcaagagcaaggcaaaggtcggcatgagaagctc
agcacctttggcctcatgtgcaagatggctgatcagactctcttcgccatcgtggagtgg
gcgcggagctgcatcttcttcaaggagctggaggtgggcgaccagatgaagttgctgcag
aactgctggagcgagctgctagtgttcgaccacgtctaccggcagctgcagcacggcaag
gagcacagcgtgctgctcgtcaccggccaggaggtggacatgtcgactgtcgcagcgcag
gctggctccatcctgaacacgttggtgctgcgggcgcaggagctcgtcctgcacttgcac
tcgctccaagtggaccggcaggagtttgtctgcctgaagttcctcatcctcttcagcctt
gatgtgaagtacctggagaaccactctctggctaaggacgctcaggagaaggccaacgcg
gcactgctggagtacacggtgtgccactaccctcactccacggacaagttccggcagctg
ctgctgcggctggcggaggtccgagcgctgagcatgcaggcagaggagtacctgtaccac
aagcacctgagcggggaggtgccctgcaacaacctcctcatcgagatgctgcacgccaag
cggacttga
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