Cuculus canorus (common cuckoo): 104067002
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Entry
104067002 CDS
T08597
Symbol
YKT6
Name
(RefSeq) synaptobrevin homolog YKT6 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04130
SNARE interactions in vesicular transport
cuca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104067002 (YKT6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104067002 (YKT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104067002 (YKT6)
Membrane trafficking [BR:
cuca04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
104067002 (YKT6)
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
104067002
NCBI-ProteinID:
XP_053944827
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Position
26:6908009..6916043
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AA seq
234 aa
AA seq
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MRGAPWQFLAPLPAVQVLLPGWPHPALSHLLTAATAMRLYSLSVLYKGDPKVHLLKAAYD
VSTFNFFQRASVQEFMTFTSQLIVERSELSSRASVKEQEYLCHVYVRNDGLAGVVIADNE
YPQRVCFTLLDKVLDEFSRQVSKMDWPSGSPATIGYAALDGYLSKYQNPREADAMTRVQA
ELDETKIILHNTMESLLERGEKLDDLVSKSEVLGAQSKAFYKTARKQNSCCEIM
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggggccccgtggcagttcctggccccacttccggccgtgcaagttctgcttccg
ggttggcctcatcctgccctttcccacctcctcacagctgcaaccgctatgaggctctac
agcctaagtgtcctttacaaaggcgaccccaaagtgcatttactgaaagctgcctatgac
gtctccaccttcaacttcttccagagggccagtgtgcaggaattcatgaccttcacgagc
cagctgatcgtggagcgctcagagctgagcagcagagcctctgtcaaggaacaagaatac
ctttgccatgtgtacgttcggaacgatgggctggccggcgtggtgattgccgataatgag
tatccacaacgggtttgcttcaccttgctggacaaggtgttggatgaattctccaggcag
gtcagcaaaatggactggccctcgggctcaccggcgaccattggctatgctgccctggac
gggtacctcagcaaataccagaacccccgggaggctgatgcgatgaccagagtgcaggca
gagctggacgagaccaaaatcatcctgcacaacaccatggagtcactgttggagcgagga
gagaagctggacgacttggtctctaaatcagaggtgctgggggcacagtccaaagccttc
tacaaaactgcccgaaagcagaattcctgctgtgaaatcatgtga
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