Cuculus canorus (common cuckoo): 104067040
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Entry
104067040 CDS
T08597
Symbol
PARP1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03410
Base excision repair
cuca04210
Apoptosis
cuca04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104067040 (PARP1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104067040 (PARP1)
04217 Necroptosis
104067040 (PARP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuca03032
]
104067040 (PARP1)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104067040 (PARP1)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104067040 (PARP1)
Enzymes [BR:
cuca01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
104067040 (PARP1)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104067040 (PARP1)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
104067040 (PARP1)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104067040 (PARP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
104067040
NCBI-ProteinID:
XP_053918944
LinkDB
All DBs
Position
3:89219305..89252681
Genome browser
AA seq
1045 aa
AA seq
DB search
MRPGAEAGARARRSAKGPAGEGAAAGEGTAAEAAMAEPVEKLYRAEYAKSGRASCKKCGE
SIAKDSLRLALMVQSPMFDGKVPHWHHYSCFWKRARIVSHTDIDGFSELRWEDQEKIKKA
IETGGPGGGKGGEQEGGGKAEKSLHDFAAEYAKSNRSTCKGCEQKIEKGQIRISKKMVHP
EKPQLGMIDNWYHLDCFVSRRVELGFLPVYGASQLLGFSILKAEDKETLKKQLPATKSEG
KRKGEEVDGNVTVKKKQKKEKERESKQEKQLKEQTELIWGIKDELRKVCSTNDLKELLIA
NKQEVPSGENAILDRVADGMAFGALLPCEECKGQFVFKSDAYYCSGDITAWTKCVSKTQA
PNRKDWVIPKEFREIPYLKKFKCKKQDRVFPPDAATGNSVSPPSASAPLTETASAPRDKP
LTNMKILVVGKLSKNKEEVKSIVEELGGKMTTTANKATLCISTQKDVEKMSKKMEEVKEA
KVRVISEEFLQDVKSSGKNFQELVSRHVLSTWDAEVKMEHEEMAVDGKSSKPPSMKSAGK
VKEEQGPSKSEKKMKLTVKGGAAVDPDSGLEDSAHVFEKGGKIYSATLGLVDIVKGMNSY
YKLQLLEDDRENRYWVFRSWGRVGTVIGSNKLEQMPSKEDAVEHFLNLYEEKTGNSWHSK
NFTKYPKKFYPLEIDYGQDEEAVRKLTVGAGTKSKLPKPVQDLIKMIFDVESMKKAMVEF
EIDLQKMPLGKLSKRQIQSAYSILNEVQQAVSDSSSESQILDLSNRFYTLIPHDFGMKKP
PLLNNLEYIQAKVQMLDNLLDIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSE
EAKIIKQYVKNTHAATHNAYDLKVVDIFRIEREGESQRYKPFKQLHNRQLLWHGSRTTNF
AGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQADPIGLVLLGEVALGNM
CELKNASRITKLPKGKHSVKGLGKTAPDPTATITVDGVEVPLGNGISTGINDTCLLYNEY
IVYDVAQVNLKYLLKLKFNYKTSLW
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgggcgccgaggcgggggcgcgtgctcggcgttcggctaagggccccgcgggc
gagggggcggcagcgggggaaggcactgcggcggaggcagcgatggcggagccggtggag
aagctgtaccgggcggagtacgccaagagcggccgcgcctcctgcaagaagtgcggcgag
agcatcgccaaggattcgctgcgcctggccctgatggtgcagtcgcccatgtttgatggc
aaagtccctcactggcaccactacagctgcttctggaagcgggctcgaattgtgtcccac
acagacattgatggcttctctgagctccggtgggaagatcaggagaaaataaagaaagcc
attgaaactggaggccctggaggaggaaaaggaggggaacaggagggaggtggtaaggct
gagaagagcttacatgactttgctgcagaatatgctaagtctaatagaagtacttgcaaa
ggctgtgaacagaagatagaaaagggccagatccggatttccaagaagatggtgcatcct
gaaaagccgcagttgggaatgatagataactggtaccacttggactgctttgtgagccgc
agagtggagctgggcttcctcccggtgtatggggcctcccagctcctgggcttcagcatc
ttgaaagctgaagacaaagaaactctgaagaagcagctcccagctaccaagagtgaagga
aagagaaaaggagaagaggtagatggaaatgtgactgtgaaaaagaagcagaaaaaagaa
aaagagagagaatcaaagcaagagaaacagctcaaggagcagacagagctgatctggggc
atcaaggatgagctgaggaaggtctgctccactaatgacctgaaagagctgctgatcgcc
aacaagcaggaagttccttcaggggagaatgctattttggaccgagtagcagatgggatg
gcatttggagctctgcttccctgcgaggagtgtaaagggcagtttgtgttcaagagtgat
gcatattactgttcgggggatattactgcttggactaagtgtgtttctaaaacacaggct
cccaacaggaaagactgggtgatcccaaaggagtttcgggaaattccttacctgaaaaaa
tttaagtgtaagaagcaggacagggtattccctccggatgctgcaactgggaactctgtg
tctcctccctctgcatctgctcctttgacagagactgcgtctgcacccagagataaacca
ctgaccaacatgaagatcctggttgttggaaaactgtcaaagaacaaggaggaggtgaaa
agcattgtggaggagctgggaggaaagatgacaacaacagctaacaaagccaccctgtgc
atcagcacacagaaggatgtagagaagatgagcaagaagatggaagaggtgaaggaggcc
aaagtccgtgtgatctctgaggagtttcttcaggatgtgaaatcctccggcaagaacttt
caagagcttgtgtctcgccatgtgctttcaacttgggatgcggaggtgaaaatggagcat
gaggaaatggctgtggatgggaagtccagcaagcccccaagtatgaagagtgctgggaag
gtcaaagaagaacaaggacctagcaagtctgagaagaaaatgaagctaacagttaaaggt
ggagcagcggtagatcctgattctggtttggaggattctgctcacgtctttgaaaaaggt
ggaaaaatttacagtgcaaccctgggcttagtagatattgtgaaaggaatgaattcctat
tataaactgcagctgctggaagatgacagagagaacagatactgggtgttcagatcttgg
ggtcgcgtgggcactgtaattgggagtaacaagctggaacagatgccgtctaaagaagat
gctgttgaacacttcctgaatttgtatgaagagaaaactggcaattcttggcattcaaag
aacttcactaaataccccaaaaaattctacccactggaaatagattatggacaggatgaa
gaagctgtcaggaaactgacagtgggtgctgggactaagtcaaaacttcctaagccagtc
caagaccttattaagatgatctttgatgtagagagcatgaagaaggcaatggtggaattt
gagattgacctgcagaagatgcctttgggaaaactgagcaagcgacagatccagagcgca
tactccatcctaaatgaagttcagcaggcagtttctgacagcagttcagaatcccagatc
ttggacctctccaaccgcttctatactctaattcctcatgactttgggatgaagaaacca
cctctcctaaataacttggaatacattcaggctaaagtgcagatgttggacaacttgctt
gatattgaggttgcttacagccttctcagaggtggaaatgaagatggagataaagaccca
attgatatcaactatgaaaagcttcgaactgatattaaggttgttgacaaagattcagaa
gaagccaagattattaaacaatatgtgaaaaatactcacgctgctactcacaatgcatat
gacctcaaagttgtggatatcttcaggattgagcgtgaaggagagagtcagcgttacaaa
ccgtttaagcagcttcacaatcgccagctgctatggcatggttctcgcaccaccaacttt
gctggcatcctctcacagggtctccggatagccccccctgaagctcctgtgactggctac
atgtttgggaagggcatctattttgcagacatggtatccaagagtgccaactactgtcac
acatctcaggctgatcccataggcctagtacttctgggagaagttgcccttggaaatatg
tgtgagctaaagaacgcttctcgcataacaaaattgcctaagggaaaacacagtgtgaaa
ggtttgggcaaaactgcacctgatcctacagccactatcaccgttgatggtgtggaggtt
cccttagggaatgggatctcaacaggaattaatgatacttgtcttctgtataatgaatat
attgtatatgatgttgctcaggtaaatctgaagtacctgctgaaactgaaattcaactat
aagacatcactctggtga
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integrated database retrieval system
