KEGG   Cuculus canorus (common cuckoo): 104067058
Entry
104067058         CDS       T08597                                 
Symbol
SDE2
Name
(RefSeq) splicing regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
cuca  Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cuca03041]
    104067058 (SDE2)
   03032 DNA replication proteins [BR:cuca03032]
    104067058 (SDE2)
   03400 DNA repair and recombination proteins [BR:cuca03400]
    104067058 (SDE2)
Spliceosome [BR:cuca03041]
 Complex C
  Other components
   Complex C specific factors
    104067058 (SDE2)
DNA replication proteins [BR:cuca03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    104067058 (SDE2)
DNA repair and recombination proteins [BR:cuca03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    104067058 (SDE2)
SSDB
Motif
Pfam: SDE2_2C SDE2 Sde2_N_Ubi_vert TerB_C Exonuc_VII_L
Other DBs
NCBI-GeneID: 104067058
NCBI-ProteinID: XP_053919203
LinkDB
Position
3:89412744..89422270
AA seq 413 aa
MGPLVRDPLAARARPLPLLPGVGTVRDLRRHRARAQNIPEESLYVKCNGRLVDDEDLLQD
GAVYSVEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQ
QAEREAEKEQRRLERLQRKLAEPKHFFTNPDYQQQCHEMAERLEDSVLKGLQASSSKIVS
PESGDSRKRPGESGKNGTKSQKRKCFWLGLEGLDDRDSSDSDDDNEDDSPYACDRSCPSG
SRCNENAGNSNECSSSPVDLVDDSPGTSTTEKLLEQPEGTRRGLQEENHASGQTEIPADE
NKMTKLLKEEAQEKNEVTEVLKEEEQENVSSKAQETNQIQSTEVEPIDLLAFHSAAEMEA
LGLDKLKMELMSLGLKCGGTLKERAARLFSVRGLSRDQIDPALFAKPSKGKKK
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgggtccgctagtgcgcgacccgctggcggctcgggcccggcccttgccgctgctcccc
ggggtcgggacggtgcgcgatctccgtcgccatcgcgcgcgagcgcagaatatccctgaa
gagagcttgtatgtgaaatgtaatgggcgactagttgatgacgaagacctactgcaggat
ggagctgtttatagtgtggaaccaagactttgtggtggaaaaggagggtttggatctatg
ctgcgagcacttggtgcccagattgaaaagaccacgaacagagaggcttgccgagatctc
agtggaaggagacttcgagatgtcaatcatgaaaaagcgatggctgaatgggtaaagcag
caagcagaacgagaagcagaaaaagagcaaaggcgcttggaaaggctgcagcggaaactt
gcggagccaaagcactttttcacaaatccagactaccagcagcagtgtcatgaaatggct
gagcggctagaagattcggttcttaaaggattgcaggcttcttcaagcaaaatagtgtca
ccagaaagtggcgatagtcggaagcgtccaggtgaatctggaaagaatggaacaaaatct
caaaaaagaaaatgtttttggctgggattagaaggattggatgatcgtgacagttcggat
agtgatgatgacaatgaagatgactccccttatgcatgtgacagaagttgtccgtcaggc
agcagatgtaatgaaaatgctggaaattcaaatgaatgttcaagcagccctgtggatttg
gtagatgacagtccaggtaccagcacaactgagaaacttctggagcagccagaaggtact
cgaagaggtctgcaagaagagaatcatgcaagtgggcaaactgaaattccagctgatgaa
aataaaatgacaaagctgttgaaggaagaggcccaagaaaagaatgaggtaactgaagtt
ctgaaagaagaggaacaagaaaatgtttcttctaaggcacaggaaacaaaccagatacag
agcacagaggtggaaccaatagacctactggccttccactctgctgctgagatggaagcc
ctgggcttggacaaactgaagatggaattgatgtctttaggactgaaatgtggaggcact
ttaaaggaaagagcggcaaggcttttctcagtgagaggtctgtctagagaccagattgat
cctgccttatttgcaaagccctctaaagggaaaaaaaagtga

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