Cuculus canorus (common cuckoo): 104067138
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Entry
104067138 CDS
T08597
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04010
MAPK signaling pathway
cuca04020
Calcium signaling pathway
cuca04144
Endocytosis
cuca04510
Focal adhesion
cuca04540
Gap junction
cuca04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104067138 (PDGFRA)
04020 Calcium signaling pathway
104067138 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104067138 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104067138 (PDGFRA)
04540 Gap junction
104067138 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
104067138 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cuca01001
]
104067138 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cuca04090
]
104067138 (PDGFRA)
Enzymes [BR:
cuca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
104067138 (PDGFRA)
Protein kinases [BR:
cuca01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
104067138 (PDGFRA)
CD molecules [BR:
cuca04090
]
Proteins
104067138 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Motif
Other DBs
NCBI-GeneID:
104067138
NCBI-ProteinID:
XP_009568143
LinkDB
All DBs
Position
4:29718138..29752646
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTSPRMFLILGCFLTGPFLTFCQLPLPTIVPNKNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGSHRIDIRHEENNSGLFVTVLEVGNASAAHTGLYVCYYNHTQVEDGEVEGKDIYIYV
PDPDMPFVPSMPEDQFILVEEGDPTIIPCRTTDPDAQVTLINSLDKAVFAFYDSKQGFIG
NFPAGSYTCKTMVEGVEFKSDEFLIYILRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFVHLEPQFSPLEAVNLHEDKNFVVNVQAYPAPKMYWLKDNVTLIENL
TEIVTSSNRVQETRFQSILKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALILDL
MDDHHGSAGGQTVRCLAEGTPLPEVEWLVCKDIKKCSNDTSWTLLTNNVSDIHMEAHLDE
KNMLESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSISELEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRIRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGVDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttccccacggatgttcctgatcctgggatgttttctcacaggaccattccta
acattttgccagcttcctctgccgactattgttcccaataagaatgaaatggtggtacag
ctgaattctaatttcacactcaaatgctccggggacagcgaagttagctggcagtaccca
gtgaccgagggaagccacaggatagacattagacatgaagaaaacaacagtggcctcttc
gtgacggtgcttgaagtaggaaatgcctcagccgctcatacaggcttgtatgtttgctat
tataaccacactcaagtggaggatggagaagtggaagggaaggacatctacatctatgtg
cctgacccagatatgccttttgttccttctatgccagaagaccagttcatcttagtagaa
gaaggtgatcccaccatcatcccttgccggacaactgacccagatgctcaagtgacttta
attaacagcttagacaaggctgtctttgctttctatgacagcaaacaaggcttcataggg
aatttccctgcaggctcatatacatgcaaaacaatggttgaaggtgtggagttcaagtct
gatgagttcctcatctatattttaagagctacttcacagctgccagttgaaattgaagct
cttaaaactgtctacaaaacaggcgagaccattgtggtaacttgtgtggtctttgacaat
gaggtggttaatttacagtggaattatcctgggaaagtgaaagaaaaaggtctgataaaa
cttgatgatatcaaagtcccatcgcagaagctggtttacaccttgaccattccagaggca
tcagtgaaagacacaggggattatgaatgcactgctcggcatgcaaccaaggaggttaag
gaaaataagaaagtagtcattacagttcatgacaaaggctttgtacacttggagcctcag
tttagccctctggaagctgtcaatttacatgaagacaaaaactttgttgtcaatgtgcag
gcatacccagcaccaaaaatgtactggttgaaggataatgtgactctgattgaaaatctt
actgaaattgttactagttctaacagagtccaggaaacaaggtttcagagtatattaaaa
ttgatccgggccaaggaagaagacagtggatactacactttggttgctgaaaatgaagat
gagattaaaagatacaccttctccttgctaatacaagttccagccctgatcttagacctc
atggatgatcaccatggctctgcaggtgggcagacagtgaggtgcttggcagaggggacc
ccgcttcctgaagttgagtggctggtttgcaaggacattaaaaagtgcagcaatgacacc
tcatggactcttttgactaacaatgtctctgatatacacatggaagcccacctggatgag
aaaaatatgctggaaagccaggtgaccttccagaaggtagaggaaaccctggctgtgaga
tgtgtggcaaggaatgaccttggtgctgttactcgggaactgaagcttgtggctccaacc
ttgcgatcagaactaacagtggccgctgcagtcttagtgctgctagtcattgtgataatt
tcactgattgtcctggtcatcatatggaaacagaagccaaggtatgagataagatggaga
gtcattgagtctatcagccccgatggccatgaatacatctatgtggacccaatgcaactg
ccttatgactccagatgggagtttcctcgagatggattagtgctgggtcgaatccttggt
tctggtgcatttggaaaagtagttgaagggactgcgtacggattgagtcgctctcaacca
gtgatgaaagtagctgtgaagatgctaaaacctacagctagatccagtgaaaaacaggca
ctcatgtctgaactgaagataatgacacatcttgggccccacctcaatattgtgaatctg
cttggagcttgtacaaaatcaggtcctatttacatcatcaccgaatactgcttttatggt
gatttggtgaactatctgcataagaacagggataatttcctaagtcgacacccagagaag
ccaaagaaagatttggatatctttgggatgaacccagctgatgaaagcacaagaagttat
gtgatattatcatttgaaaacactggagaatacatggacatgaaacaagccgatacaact
cagtatgtgcctatgctggaaaggaaggagggctctaaatactctgatattcagagatct
gtgtatgatcgtccggcttcctataagaagaaatctatatcagaattagaagtaaaaaac
cttctttcagatgacagttcggagggcctgagcctactggacttgctgagcttcacatac
caggttgcgcggggaatggaattcttggcttctaaaaattgtgtgcaccgtgacttggca
gctcgaaatgtcctcctggctcaaggaaaaatcgtgaagatctgtgactttggactggct
agagacatcatgcatgattccaattatgtctccaagggcagcactttcctcccagtaaaa
tggatggcacctgaaagcatttttgacaatctgtacacaacattaagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcaccccatatcctggtatgatg
gttgattctactttctacaataagatcaagagtggataccgaatggccaaacccgatcat
gctaccaatgaagtgtatgagatcatggtgaagtgctggaacagtgaaccagagaaaaga
ccttctttttaccatttgagtgaaattgtggagagtttgttgcctggagagtacaaaaag
agctacgagaagattcacctggactttctgaaaagtgatcacccagctgtcacacgcatc
agaggggactgtgacaatgcttacattggtgttacctacaagaatgaagacaaactaaag
gacagggagagcggatttgatgagcagaggctgagtgctgacagtggatatatcatcccc
ctgcctgacattgaccctgtttctgaagatgagcttggcaaaagaaacagacacagttcc
cagacatctgaagaaagtgccattgaaactggttccagtagctctactttcatcaagaga
gaggatgagaccattgaggacattgacatgatggatgacattggggtcgactcttcagac
ctggtggaggacagcttcctgtaa
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