Cuculus canorus (common cuckoo): 104067224
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Entry
104067224 CDS
T08597
Symbol
SLITRK5
Name
(RefSeq) SLIT and NTRK-like protein 5 isoform X1
KO
K25836
SLIT and NTRK-like protein 5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104067224 (SLITRK5)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
104067224
NCBI-ProteinID:
XP_053912689
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All DBs
Position
1:complement(56295849..56305373)
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AA seq
1023 aa
AA seq
DB search
MCARPCASAGASAPPACGGGVSVRAPHQASPAAEILASAPAAPRSARAAGRNLHGLPPCL
GPGDFGRRNKMYACCSTVTLEQDLNKKMHIWMLQTIAFALTSLVLSWAESIEYYGEICDN
ACPCEEKDSILTVSCENRGIISLFEISPPRFPVYHLLLSGNLLNRLYPNQFVNYTGASIL
HLGSNDIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEP
NAFSKLHLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVEL
QLEENPWNCSCELIALKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQELCPRRLIL
DYEMRPQTPLSTTGYFHTTPASVNSVATSSSAVYKSPLKPPKGTRQPNKTRVRPTSRLPS
KDLGYSNYGPSIAYQTKSPVPLECPTACTCNLQISDLGLNVNCQERKIESISELQPKPYN
PKKMYLTENYIALVRRADFVDATGLDLLHLGNNRISVIQDRAFGDLTNLRRLYLNGNRIE
RLSPELFYGLQSLQYLFLQYNVIREIEAGTFEPVPNLQLLFLNNNLLRSLPGNIFSGLSL
YRLSLRSNHFSYLPVSGVLDQLKSLLQIDLHENPWDCTCDVVGMKLWLEQLNTGVLVDQV
ICESPKKFAQNDMRAVRVELLCPDYSDIVVSTPTPSPGQLPARTTSPSATVRLNGTAAAG
GSTGGGSSVPLSVLILSLLLVFIMSVFVAAGLFVLVMKRRKKGQGDHASANNSDVSSFNM
QYSVYGGGHHHHHHHPHLQQHPPHRGGGGSAALPKVKTPAGHVYEYIPHPLGHMCKNPIY
RSREGNAGEDYKDLHELKVTYGAHPLQPGGGTAPPPPPPPPPPPAPGGEEAPARSPAYSV
STIEPREELLSPGQDADRFYRGILEPDKHSPSSALGTPGSALPEYPKLPAAYTYSPNYDL
RRAHQYLHPGPGDGRLRETVLYSPPSTVYVEPNRNEYLELKAKLNAEPDYLEVLEKQTTF
SQF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgcgcccctgtgcgagcgctggtgcctcggcgccgcctgcgtgcggggggggg
gtgtcggtgcgcgctccgcaccaagcctccccggctgccgagatactcgcctccgccccg
gcggctccgcgcagcgcccgcgcagcggggaggaatcttcatgggctgccaccatgcttg
ggccctggagatttcgggcgaagaaataaaatgtacgcttgctgctctacagtaactttg
gaacaggatctcaataaaaaaatgcatatctggatgctgcagacgatcgcatttgcttta
acatcgctagtcctttcgtgggcagaaagcatcgagtattatggggaaatctgtgataat
gcatgtccttgtgaggagaaggacagcatcttaacagtgagctgtgaaaacagagggatc
atcagcctttttgagatcagtccaccaaggttccccgtgtaccacctcttgttgtctgga
aaccttttgaacaggctgtatccgaaccagtttgtcaattacacgggcgcttcaattttg
catctggggagcaatgacatacaagacattgaaaccggggcctttcatggtctgagaggt
ctaaggaggctgcacctgaacaataacaagctggaacttttacgggatgacactttcctt
ggactagagagtttggaatacctacaggtcgattataattatattagcgtcattgaaccc
aatgccttcagcaaactgcatttgctgcaggtgctgattctcaatgataacctcctctcc
agtttgcccaacaaccttttccgttttgtgcccttaacacacctggacctgaggggtaac
cggctgaaactattgccctatgtgggccttttgcagcacatggataaagtggtagagctg
cagttggaggaaaacccctggaattgctcttgtgagttgattgctctaaaggattggctg
gacagtatctcctactctgctctggtgggagatgtggtttgtgagacccctttccgctta
catggtcgagatttggatgaagtctccaagcaggagctttgccccagacggctcatcttg
gattatgaaatgagaccacagacaccattgagcaccacagggtatttccacactacccca
gcctcagtcaactctgtggccacttcttcttcagctgtttacaaatcccctttgaagccc
cccaaagggacccgccaacccaacaaaacaagggtgcgacccacttcccgcctgccctca
aaagacctgggatacagcaactacggacccagcattgcctaccagaccaaatccccggtg
cctctggagtgccccactgcctgcacttgcaacctgcagatttctgatctgggtctcaat
gtcaattgtcaggagaggaagattgagagtatttctgaactgcagcccaaaccctataat
cctaagaagatgtatctgacagaaaactacattgctttggtacgcagggcagattttgtg
gatgccactgggctggatttgctgcatctgggtaataatcggatctcggtcattcaggac
cgagcttttggggatttaactaatttgcgaaggttgtacctgaatgggaaccggatcgag
cggctgagcccagagctgttctatgggctgcagagcctgcagtacctcttcctgcagtac
aacgtcatccgggagatagaggcgggcacctttgaaccggtcccgaaccttcagctgttg
tttttgaacaacaacctgctgaggtctttgccagggaacattttttctggtctgtctctc
tacaggctgagcctgcggagcaaccacttctcctacctgccagtgagcggggtgctggac
cagctgaaatccctgctgcagatcgacctgcacgagaacccctgggactgcacctgcgac
gtggtcggcatgaagctgtggctggagcagctcaacaccggtgtcctggtggaccaggtt
atctgtgagtcccctaagaagttcgcccagaacgacatgcgggccgtgcgggtggagctg
ctgtgtcccgactactcggacatcgtcgtctccacgcccacgccgtcgccgggccagctg
ccggccagaaccacctccccgtccgccaccgttcgcctgaacggcacggcggcggcaggg
ggctcgacgggcggcggctcctcggtgccgctctcggtgctgatcctcagcctgctgctg
gtcttcatcatgtcggtcttcgtggcggcggggctcttcgtcctggtgatgaagcgccgc
aagaagggccaaggcgaccacgccagcgccaacaactccgacgtgagctccttcaacatg
cagtacagcgtctacggcggcggccaccaccaccaccaccaccacccacacctccagcag
cacccgccccatcgcggcggcgggggcagcgcggcgctgcccaaagtgaagacgcccgcc
gggcacgtctacgagtacatcccgcaccccttgggccacatgtgcaaaaaccccatctac
cgctcgcgagaaggcaacgcgggggaggattacaaagacctccacgagctcaaggtcacc
tacggcgcccaccccctgcagcccggggggggcacggcgccgccccccccgccgccgccg
cccccgccgcccgcgcccggcggggaggaggcgcccgcgcgcagccccgcgtacagcgtg
agcaccatcgagccgcgggaggagctgctctccccggggcaagacgccgaccgcttttat
aggggcattttggagcccgacaaacactcgccctcttccgcgctgggcacgcccggctcc
gctctccccgagtaccccaagctccccgccgcctatacctactcccccaactatgacctt
aggcgcgcccaccagtacttgcacccggggccgggggacggcaggctccgggagacggtg
ctctacagccccccgagtactgtctatgtagagcccaacaggaacgagtacctggagcta
aaagcaaaactaaacgcagagccggactacctcgaagtgctggaaaaacagaccacgttc
agccagttctga
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