Cuculus canorus (common cuckoo): 104067232
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Entry
104067232 CDS
T08597
Symbol
CDH5
Name
(RefSeq) cadherin-5 isoform X1
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04514
Cell adhesion molecules
cuca04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104067232 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104067232 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104067232 (CDH5)
04090 CD molecules [BR:
cuca04090
]
104067232 (CDH5)
Cell adhesion molecules [BR:
cuca04515
]
Cadherins
Major cadherins
104067232 (CDH5)
CD molecules [BR:
cuca04090
]
Proteins
104067232 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_pro
Orf78
Motif
Other DBs
NCBI-GeneID:
104067232
NCBI-ProteinID:
XP_009568238
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All DBs
Position
13:20092742..20121584
Genome browser
AA seq
776 aa
AA seq
DB search
MNRLILIFLVLLAPAFADKERQKTNQNFSSNNANHKRLKRDWIWNQMHIKEEIDTPLPHH
VGKITSSVRNNNAKYIIEGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRRN
NQSLEPPSKFIIKVYDINDNAPVFVQKVFNGSVPEMSPVGTPVTKVTAVDADDPTVTGHA
TVTYQVIKGDEYFTIDDSGVISTARADLDRETQSTYEVIVKAKDAPGFSGDSSTATVTIT
LTDINDNFPVFKHQSFHFKVPENISVGGEVGRVKVEDIDEPQHRNTKYSFVRGDYRDTFE
IVANPYTNEGIIRPKKPLDFEKVAEYRFDIEATDPTVNLRYFKSGGSKSISAVTIEVTDI
DEPPVFTKLPYEFKVRENDPEIRTLGSVWAHDPDAAKRKIRFSRRRASPNGDYIRVSDTG
IIQLPKPLDREFSSSYNITVAAQEILEDGRLSDRESHAQVHVIVTDENDNAPELVYPEEP
RVCENAAPGKVIIRISATDKDEISPRGFFRFSLATEDSNFSLVENYDNTANITVKYGQFN
RELAKIHYLPVIISDNGDPELSSTNTLVISVCKCNEKGNFTFCEERAKQVGVSIQALVAI
FICIFTIIVLFAVIALLILLRKRHKKDLSGLGRNVAEIHEQLVTYDEEGGGEMDTTSYDV
SVLNSVRKNGIKAEAAPSPYAQVQKPPANITSSAGEMEMMIEVKKDEADNDRDLLPYDTL
HIYGYEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPNEDFVY
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccttattctaattttcttggtgctcttggctccagcatttgctgacaaagaa
aggcagaaaacaaaccaaaacttttcttccaacaatgccaatcacaaacgactgaaaaga
gactggatatggaaccaaatgcacatcaaagaggagattgataccccattaccacaccat
gttggcaagatcacatccagcgtaaggaacaacaacgccaagtatatcattgaaggtgaa
tatgccaacaccattttcaaagtggaagagaccagtggtgatgtatatgcatttgagagg
ttagacagagaaaagaaggccgagtacgagctgactgctctcattatcgacagaagaaac
aaccagtcactggaacccccatctaaattcattatcaaggtctatgatatcaatgacaac
gcccctgtctttgtacaaaaggtattcaatggatctgttccagaaatgtcaccagtagga
actccagtcaccaaagtgacggctgtagatgctgatgacccaacagttacaggtcacgcc
acagttacctaccaagtcatcaaaggagatgaatacttcacaattgatgattcgggtgtg
atttctacagcaagggctgatctagacagagagactcaatcgacttacgaagttattgtt
aaagcaaaagatgccccagggttttctggggattcgagcacagctactgtcaccatcact
ttaactgacatcaacgacaacttcccagtattcaaacaccaatcatttcactttaaagtt
cctgaaaacatttccgtaggaggagaagttggcagagtcaaagtagaagatattgatgaa
ccacagcacaggaatacaaaatacagttttgtcagaggagattacagggacacctttgaa
attgtagcaaatccatacacaaatgaaggaatcattcggccaaagaagcccctggacttt
gaaaaagtagcagaatacaggtttgacattgaagcaacagatcccacagtcaatcttcgc
tattttaaatccgggggctccaagagcatttcagcagtgaccattgaagtcaccgacatt
gatgagcctcctgtcttcactaaactgccatatgaatttaaagtgagggaaaatgaccca
gaaataagaactcttggttcagtttgggcacacgaccctgacgcagctaaacggaaaatc
agatttagtcgacgaagagctagtcctaacggagactatattagggtatccgatactgga
attattcagcttcccaagcccctggacagagaattcagttcttcatacaacatcactgtc
gcagctcaggaaatccttgaggatggacgtctgtctgacagagaatcacatgcccaagtt
cacgtaatagtgactgatgaaaatgataatgctccggaacttgtttatcctgaagaacct
agagtgtgtgaaaatgcagcaccaggaaaggtgatcatcaggatttcagctactgacaag
gatgaaatatcacctagaggtttcttcaggttctccctggccacagaagacagcaacttc
tccttagtggagaactatgataacacagctaatatcactgtcaaatatggacagttcaat
cgtgaacttgccaaaatccactacctgcctgtcatcatctcagacaatggcgatcctgag
ctcagcagcacaaacactcttgtcatcagtgtctgcaagtgcaatgaaaaaggcaacttc
actttctgtgaggaaagagctaagcaagttggagttagcatacaagcactggtggcaatt
tttatctgtatcttcacaatcatcgttctctttgcagtaatcgcattgctaattcttcta
agaaaaagacacaagaaggatttgagtggtcttgggaggaacgtggcagagattcatgag
cagcttgtcacttatgacgaagaaggtggtggtgaaatggacaccaccagctatgatgtg
tccgtactcaattctgtccgcaagaacggtataaaggcagaagcagctccctctccatac
gcacaagtccaaaagcctcctgcaaatataacttctagtgctggagaaatggaaatgatg
attgaggttaagaaggacgaagccgacaatgacagggatttgctgccatatgacacactt
cacatttatggctatgaaggtgccgagtccattgcagaatctctcagctctttgggatca
ggctcttcagactcagatattgattatgactttctaaatgactggggacccaggtttaag
atgttagctgagttgtatggctcagaaccaaacgaagattttgtatattaa
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