Cuculus canorus (common cuckoo): 104067266
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Entry
104067266 CDS
T08597
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104067266 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104067266 (LRRC4C)
Cell adhesion molecules [BR:
cuca04515
]
Immunoglobulin superfamily
NGL family
104067266 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Herpes_gE_N
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
104067266
NCBI-ProteinID:
XP_053923010
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Position
5:complement(47517885..48047001)
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AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTRVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
SWETTNMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgctcgtggtgctgttggctcttcagcttcttgtggttgctggt
ctagtgagggctcaaacttgcccttctgtctgctcctgcagcaaccaattcagtaaagtt
atttgtgtacggaaaaatctgagagacgtgccagacggcatctccaccaacacgcggtta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaagcatctgagg
cacctagaaatcttgcagctcagcaggaatcacatcagaacaattgaaataggggctttt
aatggtctggccaacctcaacactttggaactctttgacaatcgtctgactactatccca
aatggggcttttgtatacctgtcaaaactgaaggaactgtggctgagaaacaatcccatt
gaaagtatcccttcttatgcttttaacagaatcccttctctccggaggctggatctgggg
gaactgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtcaaacttgagg
tatttgaaccttgccatgtgcaatcttcgagagatacctaacctcaccccacttgtaaaa
ctggatgaattagatctttctgggaatcacttgactgccatccggccaggttctttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgcttttgataatcttcagtcacttgtagagatcaatctggcacacaacaatctgaca
ctgttgcctcatgacctgttcacaccactccgcctagaaaggattcacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggatcaaagacaaggcaccc
tctaatactgcatgctgtgcccgttgccacacacctcccagtttaaaaggaaggtatatt
ggtgagctggacctgaattacttcacatgttatgctccagtcatagtggaaccaccggca
gacctcaacgtcacagaaggcatggctgcagagatgaaatgccgggcatcaacctccctg
acctctgtatcttggattactccaaatggatctgttatgacgcatggggcatacagagtt
cggattgctgtgcttagtgatggcacattaaattttacaagggtaactgtgcaagacacg
ggtttgtatacatgcatggtgagtaattctgttgggaatactacagcttctgccacactg
aatgtgactgccctggataaccctggttacacatacttttcaactgtcacagtagagact
gtggaaccttctcaggatgaggcacagacaacagagcaggttgggcccacacctgttacc
agctgggagaccactaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacgttcaccattcctgtgacagacgcaaacaatgggatcccgggaatagatgaggtt
atgaagactaccaaaatcataattggttgttttgtggctatcactctcatggctgctgtg
atgctagtaattttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctcca
acgcggactgtagagatcattaatgtggatgatgagcttacaggtgacacgcccatagag
agtcacttgcccatgccagcaatagagcatgagcacctaaatcactataactcttataag
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgatccgaatgaactcaaaagacaatgtacaagagactcaaatctaa
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