Cuculus canorus (common cuckoo): 104067279
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Entry
104067279 CDS
T08597
Symbol
INO80
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104067279 (INO80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104067279 (INO80)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
104067279 (INO80)
INO80 complex (yeast)
104067279 (INO80)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DUF5896
Motif
Other DBs
NCBI-GeneID:
104067279
NCBI-ProteinID:
XP_053923617
LinkDB
All DBs
Position
5:50253029..50323319
Genome browser
AA seq
1561 aa
AA seq
DB search
MASELGAREDGSCSELAKPLYLQYLEKALRLDQFLRQTSAIFNRSISSDESEDGLDDNPL
LPQSGDPLMQVKEEPPNSLLGESSGAGNSGVLNTHSLNGVLQPEPKSEKGSLYNFSKLKK
SRKWLKSILLSDDSSDTDSPSDEDGEDEEEFSLSREELHNMLRLHKYKKLHQSKYSKDKE
LQQYQYYSTGLLSTYDPYYEQQRHLLGPKKKKFKEEKKLKGKLKKVKKKRRREEEHSSEE
SPRHHHHQTKVFAKFSQDTPPPGPKKKHMSIEQLNARRRKVWLSIVKKELPKAYKQKASA
RNLFLTNSKKLAHQCMREVRRAALQAQKNCKETLPRARRLTKEMLLYWKKYEKVEKEHRK
RAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDIGHDGIQEEILRKLE
DSSTQRQIDIGGGVVVNITQEDYDSNYYKAQALKNAEDAYQIHQARTRSFDEDAKESRAA
ALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGING
ILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFARFVPKFKVLPYW
GNPHDRKVIRKFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKS
SSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIES
HAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQQTSRQKLLYQALK
NKISIDDLLQSSMGTTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQ
ISKFIYRHGQIRVFNHSRDRWLRVLLSPFAPDYIQQSLFHRKGINEESCFSFLRFIDVSP
AEMANLMNQGHLARWLALFLSLKASYRLHHMRSWVEAEGEKQLGSRFLTNRDFLLDVNFP
LSFPNLHSCTLLQNLVFSSHCKAVTGYSDHVIHRRRSATSCVRCCQVTELPSFLCIASPR
VTAVPLEFYCNDRSAEYERRALKEGGSLEAKQCVLHGAPELAADWLKQCSQFFPEYPGGL
LGIRPQNGWSFIRIPDKESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEY
MVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDS
DWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKP
DTLKPKEVVSLLLDDEELEKKLRQRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELDG
KRKKEGANLVIPFVPSADNSNLSADGDDSFVSVDSAMPSPFSEISISSELHMGSIPPDES
SSDMLVIVDDPASSAPQSRATNSPASITGSVSDTVNGVSMQDTPLTGRGQSSRSRGRPKG
SSGGSKGGAGKGRSRKSIAGSAAAMAGAKAGAAAASAAAYAAYGYNVSKGMSASSPLQTA
IIRPTGIADFGPSSASSPLSSPLSKGNSVCGTTKGLNMASSLISETPIRKQSKGAHTSGG
R
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggagctgggtgctagggaggatggcagctgctcagagctggcaaaacccctt
tatctgcagtatctggagaaagcgctgcgattggatcagtttttacgacagacttctgcc
atctttaacagaagtatatccagcgatgaaagcgaagatggattggatgacaatcctttg
ctgcctcagtctggggatcccctgatgcaagttaaggaagagcctccaaactctttgctg
ggggagtcttctggagctgggaattctggggtgctgaacacacattccctgaatggagta
ctgcagccagaaccaaagtctgaaaaggggagcttgtataacttttccaaactgaagaaa
agcagaaagtggctgaagagtatccttctgagcgatgactccagtgacacggattcacca
agtgatgaggacggagaggatgaagaagaattttctctttcaagggaggaacttcacaat
atgttgcgattacacaaatataagaaactgcatcaaagcaaatatagcaaagacaaagag
ttgcagcaatatcagtactatagtacaggactgctgtctacatatgatccttactacgag
cagcagcgccacctgctagggcccaagaaaaagaagttcaaagaagagaaaaaattaaaa
ggcaagttgaaaaaagtaaagaaaaagaggaggcgggaagaagagcactcttcagaggag
tcaccacgacaccaccatcaccagaccaaagtttttgccaagttttctcaagatacacca
ccacctgggcccaagaaaaagcatatgagtattgagcaacttaatgcacgtcggcggaaa
gtgtggcttagcattgttaaaaaagagttgccaaaggcatacaaacaaaaagcctcagcc
cgcaaccttttcctaaccaacagtaaaaagcttgcccatcagtgcatgagggaggtacgc
cgagctgccctccaggcccagaaaaactgtaaggaaactctaccacgggcacgtcgtctt
accaaggagatgcttctctattggaaaaagtatgaaaaggtggaaaaagaacatcgcaaa
cgagctgagaaagaggctctggagcaacgcaagctggatgaggagatgagagaggctaag
agacagcagcgaaaacttaatttcctgatcacacaaactgaattatatgcccattttatg
agtcgtaaacgagatattggacatgatgggatacaggaagaaattctacgcaaactggag
gacagctctacccaaaggcagattgatattggtggaggagtagtggtcaacatcacccaa
gaagattatgatagtaactattacaaggcccaagctctgaagaatgctgaggatgcttac
cagattcatcaggcccggaccaggtcatttgatgaagatgcgaaggagagtcgggcagca
gctttacgggctgctaacaagtctggtactggctttggagagagctacagtttagcaaac
ccatctatccgggcaggagaagatattcctcagccgactatattcaatggaaaactgaaa
ggttaccagctgaaaggcatgaattggctggccaacctatatgagcagggcatcaatgga
atcctggcagatgaaatgggtctgggtaaaacagtacaaagtattgctctccttgcacat
ctggctgagagagagaacatctggggaccgtttttaataatttcacctgcctctactctt
aacaactggcaccaggagtttgccagatttgtacctaaatttaaggttctaccttattgg
ggaaatccccatgacagaaaggtgatcaggaagttttggagtcagaagacgttgtatact
caggatgctcctttccacgtggtgattaccagttatcagctagtagtacaggatgtgaag
tatttccagcgtgtgaagtggcaatacatggtgctggatgaagcacaagcgctcaagagt
agctccagtgttcgttggaagatcctactacagttccagtgtcgaaatagattgttactg
actgggaccccaatccagaacacaatggctgagctgtgggccctgctgcattttattatg
ccaacgctgtttgattcccatgaagagttcaatgagtggttttctaaggacatagagagc
catgcagagaacaaatccgccattgatgagaatcagctatctcgcttgcacatgatcctg
aagcctttcatgctaagaagaatcaagaaggatgtggaaaacgagctgtcagataagatt
gaaattctgatgtactgccagcagacaagtcgacagaagctgttgtaccaagctctgaaa
aacaaaatctctattgatgacctcttgcagtcctcaatgggcactactcagcaagcacag
accaccactagcagtctcatgaatctagtcatgcagttcaggaaggtgtgcaatcaccca
gagctgtttgagcgacaagaaacttggtctccatttcacatctccctaaagccataccag
atctcaaaattcatctaccgccacgggcagatcagggtctttaaccactcacgggacagg
tggttacgggttttactttcgccgtttgcaccagactacattcagcagtctctcttccat
aggaagggcatcaatgaagaaagctgtttttctttcctccggtttattgatgtctctcca
gcggaaatggcaaacctcatgaatcagggacatttagccagatggttagctcttttcctg
tctctgaaagcatcgtacaggctccatcacatgcgctcctgggtggaggcagaaggggag
aaacagctggggtcacgttttctgacgaacagggatttcttgcttgatgtaaatttcccg
ttgtctttccctaacttgcacagctgcactttgctgcagaaccttgtgttcagtagccac
tgtaaagcagttactggctattcggatcatgtcatacatcgaaggagatcagctacctca
tgtgtacggtgttgccaggtgactgagctgccgtccttcctgtgtatagccagtccacgg
gtaacagctgtaccactggagttctactgcaatgaccgaagtgcagaatacgagcgcagg
gcactaaaggaaggaggaagtcttgaagcaaagcagtgtgtactccatggagcccctgag
ctagcagctgactggctgaagcaatgctcccagttcttcccagagtatccaggagggctc
ttagggatcaggcctcagaacggctggtcttttattaggataccagacaaagagagtctg
atcactgacagtggaaaactccatgctcttgatcttctgttgacacggctgaaatctcaa
ggacacagagttctcatctactcccagatgacaaggatgattgacttactggaggaatac
atggtttacaggaagcatacctacatgagattagatggttcttcaaagatttctgaacga
agggacatggtagcagattttcagaacaggaatgatatttttgtgttcctgttaagcacc
agagctggaggcttgggcattaaccttacagctgcagacacggtaattttctatgacagt
gattggaacccaacagtagaccagcaagccatggaccgggcacacaggctgggtcaaaca
aaacaagtcactgtgtaccggttgatatgtaaaggcactattgaggagcgcatcttacaa
agggctaaggaaaagagtgagatccaacgaatggtgatttcaggtggcaatttcaagcct
gacaccttgaagccaaaggaggtggtcagccttctgctggatgatgaggaactagaaaag
aaattgcgtcaacgtcaagaagagaagcgacagcaagaagaaacaaatcgtgtgaaggaa
cgtaaacgtaaaagggagaagtatgctgaaaagaagaagaaggaagatgaattagatggg
aagaggaagaaagagggtgcaaaccttgtgatcccatttgttccctcagctgataactcc
aacctgtctgctgatggggatgactccttcgttagtgtagactctgccatgcccagccct
ttcagtgagatctccattagcagtgaattacatatgggctctatccctcctgatgagagc
agtagtgatatgcttgtgattgtggatgatccagcttcttcagcacctcagtcaagggca
acaaactctcctgcttccattactggctcagtttcagatactgtgaatggtgtttcaatg
caagatacacctctcactgggagaggccagtcaagtcgaagccggggtcgtcctaaaggt
tcaagcggtggatcaaaaggtggcgctgggaaaggcagaagccggaaatcgatagcagga
agtgcagctgcaatggcaggtgccaaagcaggggcagcggcagcctctgcggcagcatac
gcagcgtacgggtacaatgtctctaaaggcatgtctgcaagtagccctctacaaacagcg
attattcggcctactggaattgcagattttggaccttcaagcgcctcttctcccttgagc
tcccctttgagcaaaggaaacagtgtttgtgggaccaccaaaggcttaaacatggccagc
agtctcatatcagaaactccgattcggaagcagagcaaaggtgcccacacctcaggtggt
cggtag
DBGET
integrated database retrieval system
