Cuculus canorus (common cuckoo): 104067292
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Entry
104067292 CDS
T08597
Symbol
HARBI1
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104067292 (HARBI1)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Gene silencing
Transposable elements
104067292 (HARBI1)
BRITE hierarchy
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
104067292
NCBI-ProteinID:
XP_053923684
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Position
5:complement(51534519..51537729)
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AA seq
432 aa
AA seq
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MCRCQGALRAAAAPPSLFVFIRWGGEEWGEEEAPASPRRHFPHGAAAATAPRAAPLLGRG
PGTRWRFWGSSVREQPRRPPRPLAMAVPIAVLDCDLLLYGRGHRTLDRFKLEDVTDEYLV
STYGFPRQFIYYLVDLLGASLSRPTQRSRAISPETQILAALGFYTSGSFQTRMGDAIGIS
QASMSRCVANVTEALVERAPQFIHFPEDEATVQSLKDDFYGLAGMPGVLGVVDCTHVAIK
APNAEDLSYVNRKGLHSLNCLMVCDARGVLLSAETHWPGSLPDCMVLQQAALTSQFESQL
HKDGWLLGDSSFFLRTWLMTPLHIPETPAEYRYNMAHSATHNVIERTFRTIRSRFRCLDG
SKGTLQYSPEKSSHIILACCVLHNISLEHGLDVWSSPATSHMEQPEEEYEQMESMDSEAC
RIRQELLLTHFS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtgccggtgtcagggggcgctcagagccgcggccgcaccgccatcgctgtttgttttc
atccgttggggcggggaggagtggggggaggaggaagcgcctgcctctccgcgccggcac
tttccacacggagccgccgccgccaccgccccccgcgccgccccgctcctgggaaggggt
ccagggacacggtggaggttctggggaagctctgtaagggagcagccccggcggccaccc
cggccgttggccatggctgtccccattgccgttctggactgcgacctcttgctttatggc
cgcggacacaggactttggatcgcttcaagctggaggatgtcacggatgagtatctagta
tccacatatggctttccccgacagttcatttactacctggtggatctcctgggagccagt
ctctctcgccctacacagcggtccagggccatcagtccggagacgcagatacttgctgcg
ttgggtttttatacctctggctccttccagactcgcatgggggatgctattggcattagt
caagcctccatgagccgctgtgttgccaatgtaactgaggcattggtggaaagagcccca
cagtttattcactttcctgaggatgaagctactgttcagagcctgaaggatgacttttat
gggctggcaggcatgccgggagtgctgggggtggttgactgcacccacgtggcaataaaa
gcaccaaatgcggaggacctgtcctacgtgaacagaaagggtctccattctctgaactgc
ctgatggtgtgtgatgccagaggagtccttctgagtgctgaaacgcactggccaggcagc
ctgcccgactgcatggtcttgcagcaggcagcccttaccagccagtttgaaagtcagcta
cataaagatggctggcttcttggtgacagctccttctttctccgaacgtggctgatgacc
cctctgcatatccctgagacacctgcagagtatcgttacaacatggcgcattctgccact
cacaatgtcattgagcggacattcagaaccattaggtcgcgtttccgctgcctggatggg
tccaaaggcaccctgcagtactctccagagaaatccagccacatcattctggcctgctgt
gtgctccataacatctccctggagcacgggctggacgtgtggtcttctccggctaccagc
cacatggaacagccagaagaagagtatgagcaaatggaatcaatggactcggaagcctgt
cgtattcgtcaggagcttttacttactcattttagctaa
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