Cuculus canorus (common cuckoo): 104067293
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Entry
104067293 CDS
T08597
Symbol
ATG13
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04136
Autophagy - other
cuca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104067293 (ATG13)
04136 Autophagy - other
104067293 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104067293 (ATG13)
03029 Mitochondrial biogenesis [BR:
cuca03029
]
104067293 (ATG13)
Membrane trafficking [BR:
cuca04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104067293 (ATG13)
Atg1 complex
104067293 (ATG13)
Mitochondrial biogenesis [BR:
cuca03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104067293 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
104067293
NCBI-ProteinID:
XP_053923685
LinkDB
All DBs
Position
5:51543149..51563319
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AA seq
552 aa
AA seq
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MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKFCTRSSSSPTGSDWVDSNLAIKDI
PEVTHEAKKALAGQLPAVGRXMCVEISLKTSEGDSMELEIWCLEMNESKCDKEIKVSYTV
YNRLSLLLKSLLAITRVTPAYRLSRKQGHEYVIIYRYTFGEVQLSGLGEGFQTVRVGTVG
TPVGTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDN
GAVYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQLS
SSRLSCQPAALGVGSADMGYPVLFAGGLNAAHPHQLIGPGREGGVPLIPSQPAHGTQADQ
ERMCTPLDGGHYSATTPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQV
TMANLDIPFAMFAPKNVELEDNDPMVNPPDSPETESPLQGSLHSEGSSGSSTGNTHDDFV
MIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKN
VKEFDAFVETLQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacggtacaagtaattgtccaggcccgacttggagaaaaattctgtacccga
tcatcatcctccccaacaggctctgactgggtagattcaaatttggctatcaaagatata
ccagaggttactcatgaagcaaagaaagccctggcaggacagctacctgctgttggacgt
nctatgtgtgtggagatttctctcaaaacctcagagggggactccatggagctggaaatt
tggtgtctagaaatgaatgaaagtaagtgtgacaaagaaatcaaagtttcatacaccgtc
tacaacaggctgtctctactgctgaagtctttgcttgctataaccagggtaactccagcc
tacaggctctcaaggaaacaaggccatgaatatgtaataatttatagatatacttttggt
gaagtgcagctgagtggcttgggagaaggtttccagacagtccgtgttgggacagtgggt
accccagtgggcaccatcacattgtcttgtgcctacagaatcaacctcgctttcatgtca
accaggcagtttgagaggacccctcctatcatggggattatcattgatcactttgtggac
cgtccctatcccagctcttcacccatgcatccctgcaattacagagctggtgaggacaat
ggtgcagtgtacccctcagtagaagattcccaagaggtgtgtaccacatctttttccacc
tctcctccttctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcca
gtggtgacggacaccttgaaggtcccagtgatgggactggccttctcacatcaactttcc
agctctcgtctttcctgtcagcctgctgccctgggagttggatctgctgacatggggtat
cctgtactctttgctggtggcttgaatgctgcacaccctcaccagttgattggtccaggc
agagaggggggagttcccctgattcctagccagccagcacatggcactcaagctgaccaa
gagaggatgtgcactccactggatggaggccactactcagcaactactccttctagtagc
gaggacacagaaacagtatcaaacagcagcgaagggaaatgtggctccccacatgacctt
ttggaaaccatttttatccggaaggtgggagcttttgtcaacaaacccattaaccaggtg
accatggccaacttagacattccttttgccatgtttgctcccaagaatgttgagctggaa
gataacgaccccatggtcaatcctcctgactccccagaaactgaatctcctctacaaggc
agcttacactcggagggctccagtggcagcagcacagggaacacccatgatgactttgtt
atgattgactttaaaccagcattttcaaaagatgacattcttccaatggacctggggaca
ttttaccgtgagtttcagaacccccctcaactcagcagcctctcaattgatattggagca
cagtccatggcagaggatttggactccttaccagagaagctggcagtccacgagaaaaat
gtcaaggagtttgatgcctttgtagaaaccttgcagtga
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