Cuculus canorus (common cuckoo): 104067337
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Entry
104067337 CDS
T08597
Symbol
SAMM50
Name
(RefSeq) sorting and assembly machinery component 50 homolog
KO
K07277
outer membrane protein insertion porin family
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104067337 (SAMM50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cuca03029
]
104067337 (SAMM50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cuca02000
]
104067337 (SAMM50)
Mitochondrial biogenesis [BR:
cuca03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
104067337 (SAMM50)
Transporters [BR:
cuca02000
]
Other transporters
Pores ion channels [TC:
1
]
104067337 (SAMM50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
104067337
NCBI-ProteinID:
XP_053931348
LinkDB
All DBs
Position
1:complement(134062212..134082107)
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AA seq
469 aa
AA seq
DB search
MGTVHARSLEPLPMSGPDFSALGEQAELVEVEPEAKQEILENKDVVVQHVHFDGLGRTKD
DIIMYEIADVFKAKNLIDVMRKSHEAREKLLHLGIFRQVEVLIDTCQGDDALPNGLDVTF
EVTELRRLTGSYNTMVGNNEGSMVLGLKFPNLFGRAEKVTFQFSYGTKETSYGLSFFKPQ
PGNFERNFSVNLYKVTGQFPWSSLRETDRGISTEFNLPIWKTNHTLKWEGVWRELGCLAR
TASFSVREESGHSLKSSLFHAMVIDSRSSSILPRRGALLKINQELAGYTGGDVSFLKEDF
EFQLNKQLIWDSVFSASLWGGMLIPIGDKPSSIADRFYLGGPTSVRGFSMYSIGPQSEGD
YLGGEAYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGDGPRAHLQKLAE
YIRWSYGAGIVLRLGNIARLELNYCFPMAVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtgcacgcacggagtttggagcctcttccaatgagtgggccagactttagt
gccttgggagaacaagctgaactggttgaagttgaacctgaggccaagcaggaaattctt
gaaaacaaggatgtggtggttcagcatgtgcattttgatggacttggaaggaccaaagat
gacattatcatgtatgaaattgctgatgttttcaaagctaaaaatcttattgatgtgatg
aggaaatcacatgaagctcgtgaaaagttgcttcatctaggaatcttcagacaggttgag
gttctgatcgatacctgtcaaggagatgatgcccttccaaatggtttagatgtaaccttt
gaggtaacagaactgagaaggctaactggaagctataatactatggttggcaacaatgaa
ggcagtatggtacttgggctcaagttcccaaatctctttggacgtgcagaaaaggtaacc
ttccagttctcctatggaacaaaggaaacttcatatggcctgtcattcttcaaaccacag
cctggaaactttgaaagaaatttttcagttaacctatataaagtaactggacagttccct
tggagctctcttcgtgaaactgatagaggaatatcaacagaatttaatttaccaatctgg
aagaccaatcacacactgaagtgggagggtgtgtggagagagcttggctgccttgctaga
acagcatccttttctgttcgagaagaaagtggacactctcttaaatcttctctctttcat
gctatggtcattgattcccgtagctcttcaatcttgccaagacgaggtgctttgctgaaa
attaatcaggaattggctggctatacaggtggagacgtgagctttctaaaagaggatttt
gaatttcagttgaataagcaacttatctgggattcggttttttcagcatcactgtggggt
ggaatgctgatacctattggagacaagccatccagtatagctgataggttttatcttggt
ggaccaacaagtgtgcgtggattcagtatgtacagcattggaccccagagtgaaggtgat
tacttgggaggagaggcctactgggctggaggcttacatctatacacccctctccctttt
cggccaggacggggaggatttggagacctttttcgaacacatttcttccttaatgctgga
aacctctgcaatcttaactatggtgatggtcccagggctcatctgcagaaactggcagag
tatatccgatggtcttatggtgctggaatagtgctccgacttggaaacattgctagatta
gaacttaattactgtttccccatggcggtgcagtctggtgacaggatatgtgatggtgtt
cagtttggagctggaatcagatttctataa
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