Cuculus canorus (common cuckoo): 104067418
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Entry
104067418 CDS
T08597
Symbol
TRA2B
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104067418 (TRA2B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cuca01009
]
104067418 (TRA2B)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104067418 (TRA2B)
Protein phosphatases and associated proteins [BR:
cuca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104067418 (TRA2B)
Spliceosome [BR:
cuca03041
]
Common components
Common spliceosomal components
SR proteins
104067418 (TRA2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
104067418
NCBI-ProteinID:
XP_053930288
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All DBs
Position
9:complement(26934420..26955022)
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AA seq
189 aa
AA seq
DB search
MSTRRRHIGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRG
FAFVYFENVEDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRD
YYDRGYDRGYDDRDYYSRSYRGGGGGGGGGWRAVQDRDQFYRRRSPSPYYSRGGYRSRSR
SRSYSPRRY
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcgtaggcgccacattggaaacagggcaaatcctgacccaaattgttgtctt
ggcgtgtttggattgagtctgtacaccacagagagagacctgagagaagttttctccaag
tatggtccgattgccgacgtttccatcgtgtatgatcagcagtctcgacgctcaagagga
tttgcatttgtgtacttcgaaaatgttgaggatgctaaggaagcaaaggaacgtgccaac
ggaatggagctggatggcaggaggatccgggtagacttctccataacaaaaagacctcac
acacccacccctggaatctatatgggaagacccacttatggcagctcacgacgacgggat
tactatgaccgagggtacgaccgagggtacgacgatcgtgactactacagcaggtcctac
agaggaggcggcggtggcggcggcggaggatggagagctgtgcaagacagggatcagttc
tacaggaggagatcaccatccccgtattacagccgagggggctacaggtcccgatcccga
tcccgctcctactcacctcgccgctattga
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