Cuculus canorus (common cuckoo): 104067495
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Entry
104067495 CDS
T08597
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104067495 (UTP20)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104067495 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
104067495
NCBI-ProteinID:
XP_053937766
LinkDB
All DBs
Position
1:158097731..158162630
Genome browser
AA seq
2792 aa
AA seq
DB search
MKSKPSAHKSGNTHRFLTFSERLSNINIDIIHRIDRTGSYTEEVETYFSEALRKWRELNL
TQHFVQFYNEVANKCQSFNQLVYYQNAIVQSLKTHLQVKGSLAYQPLLDLVAQLARDVQA
DFYPHFHDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVSDKNAIFNLILRDLEEHPEKVEGVGQLIFEMCKGVRNMFH
SCAETGLKLILLKLGPVTEEEIELPWVAVGEAFKQMIKSAAVHIHKEHFDIVFKCLKESL
LDLQRKITKANCCMASEQIERILQAYLILVEHANGSKISMPEDVCWILIEMLQTPYLSSS
CCKTLLNTISAFLLAENVFLPDYVTTEAVEKVFASGFERRFILDFSEAIFRMKQFERHLL
TYFVEYIDHCFSGTDAQAKDEAMAILAKLILVKAEPPTSGSMGFEKYPLFFSKSSIRCNT
AQQTSKTQGVPVLDHVLSLIRLPEEDITDLSQAWAALVVLPHIRPMNVENILPCVTSFID
SLFTAIDKGSLCKGSLFVACQAVSTLLSLMDSSEILHLLPVERVKNLVATFPSDPSVLLL
ADLYYTSLTLCGCQKPLSQGNLIDLFEKLHHNISTGVSKVRLLTVRILNHFQDPLSTEVE
DDDTEELLPLFTILLQAELVPATVNDYRDKLVHLRKLRYDIVQSVIPSESLQEVPLRYLL
GMLYINFSPLWDPVIELITSHAKEMENKQFWKVLYEHLEKAATYAEMELQNELDEQEESI
AETESEMPEGGVRTVFLEQLRTRTDCSERLDHTNFRLLLWKALDKFPDRVEPRSRELSPL
LLRFIRNEYYPADSLVAPSQDLRKKIGGTVAAKEIPSEEVNDVAMEEEEEEEEEEKEEGE
RITVGLPKRKTRRAAAKQLIAHLKVFSKFSNPRSLFLEQKLNALYIQLLSHQDQNVQRIA
LDCIMTYKHPHLLPYRENLQRLLEDKTFKEEIVHFSISEETSVVKMEHRPDLIPVLMRIL
YGRMRNKTGSKTQGKSAAGTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNGPCQTAV
LRSMSELDLAKVLPLGRQHSLFNGLEVVLKNMGHLIHQYLPEILQILLCMTAVVSCILQQ
REKVQPRFINPLKNLRRLGLKLVAEFFSDYETYSFSVEEIDAVFHAVVWPQVCRLASESQ
YSPTFLLKLIHIWSKNPRYFPLLAKQKPDHPECDILSNVFAVLSAKNLSEATSSLVMDIA
DSLLNSPDFEPTERVSSLSVTDCVVMVTGDATEEPLSLGCRLVLPHVPAILQYFSKTMLK
VEKVKKKKYRAQVSKELSILSRISKFIQEKSQNSVLVSLLLPFLYQTNMEQGTEIDILET
VQNLLRHCSNPTSFLKPLAKLFSVIQNKVSRHKLCLVFQTLSELDSELKYITDVVKLNAF
DPRHLDDIDFDVRLSAFQSITAHIKEMQAVDIDFLIPVLHNCFYTIQLGDMALSDNASLC
LTSFIHRLAEINHTEDDYKELIQHTLLESVRRGLKSKTESVQQDYTSLLSCLIQTFPANP
EFQDMVQLTNRHDPDMDFFENMKHMQIHRRARALRKLAKQLTEQKLVLSSKSLQNYIMPY
ATTAIFNEKMLKHENMVTASVEVIGAVCRHLSWSAYLYHLKHFIHVLQTGQISPKLGVSL
LETVLEAFHFDHETLEKQLLTIENQEIAAMDLEPVVEAEEAMELEQSDGEEEVAEKNKGK
NLPEKPAEPERAAETPEDAEQVTKPVCFLPRNKEELECLIKHIQDTVTVNILPKLHRCIV
AKVKRDDEHKLVKSNVVNDDEVVRIPLAFAMVRMMQCLPQEVMEANLPSILLKVCTFLRN
RFQEIRDIARNTLTKIMEVLGVRYFLYILKEMQSTLVHGYQLHVLTFTVNLLLKGLATRL
SAGDLDPCLDILIEIFNQELFGNVAEEKEVKGIVSKVMEARKSKSFDSYEILGKFIGKGQ
VTKLILPLKEILENTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSHGLISENLPL
LTEKAKKKVDPPPDPRLQPESCLLLQPTPMRGGQKARVSSRTNTYILVDSGLRLLHMSLK
RSKVNSSEEHALEMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPSVSTNLEALI
KQLFLLLKEFAKTGIAKGQNFHLVVSCFKCVTILVKNAKSQITSKQLQVLLGFAEEDIYD
SSRQATAFGLLKAILSRKLIVPEIDDVLQKVAQMAITGQSEPVRVQCRQIYLKYILDYPL
GDKLKPNLDFILAQLEYEYETGRESALEMIAYLLDMFPKDLLHKYCGLFFLSLCMMMIND
DSAKCKKMAALTCKALLRKISNEKQDLMFSLVTEWFHSKKSSHRRLAAQACGLFVEVEGV
MFERRLKAVLTLIEDEINPIKFEDITEEEEEKAADRLLFSFLVLITKLITDCNLIQLTKN
SDIVNNIWSHVQSHLWYPHSWVWLTATEIFGLLFASYKPEDLVNKWRERKTRKGKKASAE
LSASTVFLTTELDKKMKELVFAFCHQLQSKFLDLSLGEQVIKNLLFVAKVVYLLAPALEE
SKEAEGELSCEMEEQEASEDEEEKDVSAQVDGEREETEEKGQPATLQWLMKKLSVMAKRE
AAYSPKVPLKRSCIFKFLGAISVDLGNDRIKPYLPTILTPLYRELNSTYAEQDPTLKNLA
QEIIDLLKKLVGLEAFSLAFSSVQKQANQKRAMRKKQRALQTVANPDIAARRKMKRHKNK
AETRKRKIELLRPTFKAKRPRSHALKDLAMVE
NT seq
8379 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaaaccgtcagcccacaagtcggggaacacgcaccggtttcttaccttctcg
gagcgcttaagcaatattaatattgatattattcatcggattgacagaactgggagctac
actgaggaggttgaaacctatttttctgaagcactacggaaatggagggaactgaacctc
actcagcattttgtgcagttctacaatgaagtggccaacaaatgccagtccttcaatcag
ctggtctattaccagaatgccattgtgcaaagcttgaagacgcatttgcaagtcaagggc
agtcttgcttatcaacccttattagacctagtggcacagctggctcgagatgttcaggct
gatttctatcctcactttcatgactttttcctggctatcaccaagttactggatacgcag
gacacagagctgctggaatgggcttttacctcactttcctatctctacaaatacctgtgg
agattgatggtgaaggacatacacaacatatacagcctgtacagcaccctgctggctcac
cacaaacttcacatcagaaactttgctgctgaaagttttgtttttctaatgagaaaggtt
tctgataaaaatgcgatcttcaatttaattctccgtgacctggaagagcaccccgagaaa
gtggaaggtgtaggacagctaatttttgagatgtgcaagggtgttcgaaacatgttccac
tcttgtgcagagacgggtctgaagttaattctgttaaagctggggcctgttactgaagaa
gaaattgaactgccatgggtagccgtgggagaagcctttaagcagatgatcaaatcagct
gcagtgcatatccataaggagcattttgacattgtcttcaagtgcctgaaggagtcactc
ttagacttgcagaggaaaataactaaggcaaactgctgtatggcttcagaacagatagaa
aggattctgcaagcttatctgatcctagtggaacatgcaaatggatccaaaatctcaatg
cctgaagatgtctgttggattttaatagaaatgttacaaacaccatatctctcatcatct
tgctgcaagaccttgctgaacacaatttctgcgttcctgctggccgagaatgtttttctg
cctgattatgtgaccacggaagctgttgagaaggtatttgcaagtggatttgaacggcgc
tttattctggacttctctgaagcgatatttagaatgaagcaatttgagaggcatttactt
acgtactttgtagagtacattgaccattgcttctcgggcacggatgcccaggcaaaggat
gaggccatggcaattctggctaaactcattctggtaaaagcagagcctcctaccagtggt
tcaatgggatttgaaaagtatcctctctttttcagtaaatcatccatcaggtgtaataca
gctcaacaaacaagtaaaacacaaggagtacccgtgttagatcatgtactgtctttaatc
cgtttaccagaggaggacattactgacctttcacaggcttgggctgccttggttgtactg
ccacatattagaccaatgaacgtagaaaacattctgccctgtgtgacaagttttatagac
tcactcttcacagccattgacaaaggaagtctctgcaaaggaagcctgtttgtggcctgc
caagctgtaagcactcttcttagtttgatggactcttctgaaatactccatttgttacct
gtggagcgtgtcaagaacttggtggccacttttccttcagatccttctgtgttgctgttg
gctgatctctattacacaagcctgacgttatgtggctgccagaagcccctttcccaaggg
aacctaatagacttgtttgagaagttgcatcataatatttccactggtgtttccaaggtc
cggctattgactgttcgaattctaaaccattttcaggatccactttcaacagaggttgag
gatgatgacacagaggagctcctgccactatttaccatattgctccaagcagaacttgtg
ccagcaacagtgaatgattacagagacaaacttgtccatttgaggaaactgagatatgat
atagtgcagtctgtaataccaagtgaatctttgcaggaggtgcctcttcgatatttactg
ggaatgctttatattaacttcagccctctttgggatcctgtaattgaactcattacgtct
catgcaaaggaaatggagaataaacagttctggaaggtcttatatgaacatttggagaag
gctgctacctatgctgaaatggagctgcaaaatgaactagatgaacaggaggaaagcatt
gctgaaacagaaagcgagatgccagaaggaggtgtgaggactgtcttcctggagcagctg
aggactaggacagactgcagtgagcggctggaccacacaaacttccgtttgctactgtgg
aaagcactggataagtttccagacagggtggagcctaggtcaagggaactttcccccctt
cttttgagatttattagaaacgagtactacccagcagattcattagtggctccatctcag
gatcttagaaagaaaattggtggtacagtagcagcaaaagaaatacccagtgaagaggtg
aatgatgttgctatggaggaggaggaggaggaggaagaagaagaaaaggaagaaggggaa
cgaattactgtaggactaccaaaaaggaaaacaagaagagctgctgctaagcaactaata
gctcacttaaaagttttctctaaattctccaatcctcgttcgttgtttctggagcagaag
ttgaacgcattgtatattcagttactgtcccatcaagaccagaatgtacagagaatagct
cttgactgcataatgacgtacaagcatcctcatctactgccatacagggagaacttgcaa
aggctactggaggacaagactttcaaagaagaaatagtccatttcagtatttctgaggag
acctcagtagtaaaaatggagcatcgaccagatctcattcctgttcttatgaggattctc
tatgggagaatgagaaacaaaacagggagcaaaacacagggcaagtctgcagcgggcact
cgcatgtcaattgttctgcgatttcttgccggctcactgccagaagagatacgaatgttc
ttggatctactctttgaagctgtgaagcaattcagtaatgggccttgccagactgcagtg
cttcgaagcatgtcagagttggatttagctaaagtcctgcctcttgggcgtcagcatagc
ctcttcaatggtcttgaggttgtgttgaaaaacatgggacatttgatccatcagtacctg
cctgaaattctacagattctgctctgcatgacagctgtggtatcctgcatcctccagcaa
agggagaaggtccaacctaggttcattaatccactgaagaatttgagacgtcttggactc
aagcttgtagcagagtttttttctgattatgagacctacagctttagcgtggaagagatt
gatgcagttttccatgcagtggtatggcctcaggtctgcagattggcttcggagagtcag
tattctccaacttttctgctcaaactcattcacatctggagtaagaatcccaggtatttc
cccttgctggccaagcagaagccagatcacccagaatgtgatatactgtcaaatgtgttt
gccgtgctgtcagccaagaacctgtctgaggccacatccagtcttgtgatggacatagct
gacagtcttctcaacagcccagattttgaacctacagagcgtgtttccagcttgagtgtg
actgactgtgttgtcatggtcactggagatgcgacagaagagcccctcagcctaggttgc
cgtttggttctgcctcatgttcctgccatacttcagtacttcagcaaaacaatgttaaaa
gtggagaaggtgaaaaagaagaagtatagagctcaagtcagcaaagagctgagtatactt
tccaggatcagcaaattcatacaagaaaagagtcagaattcagtgcttgtgagccttctc
ctcccgttcctgtatcagactaacatggagcagggtacagagattgacattctggagaca
gtgcaaaacttgctgaggcattgctcaaaccctacaagctttctcaaaccactggcaaag
cttttttctgtcatccagaacaaagtttcacgacataagttgtgcttggtatttcagact
ttatctgagttggacagtgaattgaaatatattactgatgttgttaagctgaatgccttt
gatccacgacatctcgatgatattgactttgatgtacgtctatcagcattccagtcaatc
acagcccacatcaaggaaatgcaagcagtggatattgacttcctcatccccgttttgcac
aactgcttctataccatccagctaggggatatggctcttagtgacaacgcaagcctctgc
ttgaccagttttatccaccgactagcagaaatcaaccacacagaagatgactacaaggag
ctaatccagcacactctcctggagtctgtgagaaggggtctgaagagtaagactgagagc
gtccagcaggactacacatcattgctttcctgtcttattcaaacgttcccagcaaatcct
gaattccaggatatggtccagttgaccaaccgccacgatcccgacatggacttctttgag
aacatgaaacatatgcagatccacaggagggcacgagctttgaggaaactggctaagcag
cttactgaacaaaagcttgtgctgtcttctaaatccctccagaactacatcatgccttat
gctactactgccatttttaatgaaaaaatgcttaagcatgaaaatatggtaacagcctca
gttgaagttattggagctgtctgccggcacctctcgtggtcagcgtacttgtaccactta
aagcatttcatccatgttctgcaaacaggacagatcagtccaaagctgggagtcagcttg
ttagagacagtgctggaagcctttcactttgaccatgaaacacttgaaaagcagcttctg
accatcgagaaccaagaaattgcagccatggaccttgagccagtggtggaggctgaagaa
gctatggagctggagcagagtgatggggaagaggaagtggctgagaaaaacaaaggcaag
aatctccctgagaagcctgcagaacctgagcgtgcagctgagacacctgaagatgctgag
caagtgaccaaacctgtttgtttcttacctcgaaataaagaggaactggagtgtctaatc
aaacacattcaagatacagttacagtcaacatcttgcctaaattgcacaggtgtattgtt
gcaaaggttaaaagagatgatgaacacaagcttgtgaaatccaacgttgtgaatgatgac
gaggtagttcgtattccgttagcttttgcaatggtcaggatgatgcagtgtcttccccaa
gaagtgatggaagccaaccttccaagcatcctgctgaaagtttgcacatttctgaggaac
agatttcaggaaatacgggacattgcccgtaacacactcactaaaatcatggaagtgttg
ggagtgcggtactttctgtacatcttaaaagagatgcagtccactcttgtccatgggtac
cagctccacgtgctgactttcactgtgaacctgttactgaagggccttgctacccggctc
agtgctggtgatttggacccctgcttagatatcctgattgagattttcaaccaggagttg
tttgggaatgtagctgaagagaaggaagtgaagggaattgtctccaaggtcatggaagca
cgcaagagcaagagttttgattcctatgaaattcttggaaagttcataggaaagggccag
gtgacgaaacttattctgcccttgaaagagattctggagaacactacaagcttgaagata
gtccggaaagtgcatgaggcactgcgtcacatcatggcagggctgatcttcaattcagac
atgaatgcagaatcccttctcctcctcagtcacggtctcatcagtgaaaacttgcctctg
cttactgagaaagccaaaaaaaaagttgaccctcctccagatcctaggctgcaaccagag
agctgcctgctactccaacccactcccatgagaggagggcagaaagcccgtgtcagcagc
aggactaacacatacatattggttgattcgggacttcggttgctgcacatgagcttgaag
agatccaaagtaaattcttctgaggagcatgctttggaaatgttagatccttttgttcag
ctgcttatagactgcctgaaatctatggatgtcaaggtgataactggtgctctgcagtcc
ttggtatggattttaaagttccctttgccttctgttagtacgaatctggaggcactgatc
aagcagcttttcctcttactgaaagaatttgccaagacaggaatagccaaaggccagaat
ttccacctggttgtgagctgtttcaaatgtgtaacaatacttgtgaagaacgcaaagagt
cagataacaagcaaacagctccaagtgttgcttggctttgctgaagaagatatttatgat
tcatcacgccaagccactgcctttggccttctcaaggctattttatccaggaagctgatt
gtccctgaaattgatgatgtgctgcagaaggtcgcccaaatggccatcactggtcagagt
gagccagtgcgagtccagtgcagacagatttacttaaaatatattctggactaccccctt
ggtgacaagctgaaacccaatttggatttcatacttgcacaactggagtatgagtatgaa
actggaagggaatcagcactggagatgattgcgtacctccttgatatgttcccaaaggat
ctgctccacaaatactgcgggctgttttttctctctctttgtatgatgatgataaatgat
gactctgccaaatgcaaaaagatggcagctttgacttgtaaagctctcctcaggaagata
agcaatgaaaaacaagatctgatgttttcgctggtcacagagtggtttcatagcaagaag
agctcacacaggaggctggctgcccaggcatgcggtttgtttgttgaagtggagggagta
atgtttgaacggcgtctcaaagctgtcctcaccttgattgaagacgaaatcaaccctatt
aaatttgaagacataactgaagaggaggaggagaaggctgcagacaggctgctattcagc
tttcttgttctgataacaaagctgatcacagactgcaacttgattcagttaaccaagaac
agtgatattgtgaataatatctggagtcatgtccagtctcacctgtggtatcctcatagc
tgggtatggctgacagctactgagatctttggcttgttgtttgcatcttacaagccagaa
gatcttgtcaacaaatggagagaaagaaagacaaggaaggggaaaaaggcttcagcagag
ctgtctgcatccacagtcttcttgactactgaactggacaaaaagatgaaggaacttgtg
tttgcattttgccatcagctgcagtccaagttcctggacctgtctctgggagagcaggtt
ataaagaatttgctttttgtggcaaaagttgtttacttgctagcccctgccttagaagaa
agtaaagaggcagaaggagaactcagctgtgaaatggaggagcaggaggcctccgaagat
gaggaagagaaagacgtttctgctcaagtagatggagaaagagaagaaacagaagagaaa
ggccagccagctacattgcagtggttaatgaagaaactctctgtcatggcgaagcgagaa
gcagcatattcccctaaagtccctttaaagagaagctgcatctttaagttcctgggagcg
atctcagtggatctggggaacgacaggatcaagccataccttccaacaattctcacccct
ctgtacagggagctgaacagcacctatgcagagcaagatccaacactgaagaaccttgcc
caagaaatcatagacctgctcaagaagttagtcgggcttgaggctttctcgctcgccttt
tcttctgtgcagaaacaagccaatcagaaaagagcaatgaggaaaaagcagagagctttg
cagactgtagcaaaccctgacattgctgcaaggaggaagatgaagagacacaagaataaa
gcagaaaccaggaagagaaaaatagaactcctgcgccctaccttcaaggccaagagacct
cgaagtcacgcactgaaagatttagcgatggtggaatga
DBGET
integrated database retrieval system
