Cuculus canorus (common cuckoo): 104067513
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Entry
104067513 CDS
T08597
Symbol
ABCE1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104067513 (ABCE1)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
104067513 (ABCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
Fer4_6
AAA_15
RsgA_GTPase
AAA_29
AAA_16
VapE-like_dom
NACHT
nSTAND3
Rad17
AAA_23
Fer4_10
AAA_30
Fer4_2
SRP54
TsaE
Fer4_21
ORC-CDC6-like
Fer4_4
Fer4_16
AAA_24
Fer4_7
AAA_5
Fer4_3
AAA_19
Motif
Other DBs
NCBI-GeneID:
104067513
NCBI-ProteinID:
XP_053922202
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All DBs
Position
4:complement(65291960..65309981)
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AA seq
599 aa
AA seq
DB search
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVASQSKIAWISETLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYADPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGTVGSILDRKDETKTQTVVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
ELSIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLTPDEGGEVPVLNVSYKPQKISPKS
TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPS
KNTLANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaattaacgaggattgctattgtcaaccatgacaaatgtaagccaaagaaa
tgccgtcaagagtgcaagaagagttgtcctgtggttcgaatgggaaaactttgcatagaa
gtcgcatcacagagcaaaatagcatggatctcagaaacactttgtattggttgtggtatt
tgcatcaagaaatgtccttttggagccttgtccattgttaacttacctagcaacctggag
aaagaaacaacgcatagatattgtgccaatgccttcaaacttcacaggttgcctatccct
cgtccaggtgaagtactgggattggttggaaccaatggtattggaaaatcaactgccttg
aaaatcttagcaggaaaacagaagccaaatcttggaaaatatgctgatccacctgactgg
caagaaattttgacttatttccgaggatctgaattacaaaattattttaccaagatcctg
gaagatgacctgaaagctatcattaaacctcagtatgtggaccagatccctaaagctgca
aagggaacagtgggatcaattctggataggaaggatgaaactaagacacaaactgtcgta
tgtcagcaacttgacttaacccacctgaaagaaagaaatgttgaggacctttcaggagga
gaacttcagagatttgcttgtgcagttgtttgcattcagaaggctgatatcttcatgttt
gatgaaccttctagctacctagatgtcaagcagcgcttgaaggctgccatcacgattcga
tccctaataaaccctgacaggtacattattgttgtagagcatgatctaagtgtgttagat
tatctctctgactttatctgctgcctgtatggtgtgccaagtgcttacggtgttgttact
atgcctttcagcgtaagagaaggcataaacattttcttagatggctacgttccgacagaa
aatctaaggtttcgagatgcatctttggtattcaaggtggctgagacagcgaatgaagag
gaggtgaaaaagatgtgtatgtacaaatatccaggaatgaaaaaaaagatgggagaattt
gaactatccatagtagctggagaattcacagattctgaaattatggtgatgttgggggaa
aacggaactggcaaaactacatttatccgaatgcttgcaggaagacttacgcctgacgaa
ggaggtgaggtcccagttctaaacgtcagctacaaaccacagaagatcagtcctaaatct
acaggaagcgttcgtcagctgctgcatgagaagatcagagatgcctatacgcaccctcag
tttgtaactgatgtaatgaaacctcttcaaatagaaaacatcattgaccaggaggttcaa
acattgtctggtggtgagctgcagcgtgttgcgttagctctttgtctcggtaaacctgca
gatgtctacctaattgacgaaccttcagcgtatttggactctgaacaacgtctaatggcc
gctagagtcattaaacgtttcattctccatgctaaaaaaacagcttttgtggtagaacat
gattttataatggctacgtatcttgctgaccgtgtgattgtttttgatggtgttccttcc
aagaacacacttgcgaacagtccacagactcttctggctggaatgaataagtttttatct
caactcgaaatcacttttagaagagaccccaacaattacagaccaagaataaacaaactc
aattcaatcaaggatgtggaacaaaagaagagtggaaattactttttccttgatgattaa
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