Cuculus canorus (common cuckoo): 104067519
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Entry
104067519 CDS
T08597
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104067519 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104067519 (SMARCA5)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104067519 (SMARCA5)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104067519 (SMARCA5)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104067519 (SMARCA5)
RSF complex
104067519 (SMARCA5)
WICH complex
104067519 (SMARCA5)
B-WICH complex
104067519 (SMARCA5)
NORC complex
104067519 (SMARCA5)
BRF complex
104067519 (SMARCA5)
NuRF complex (fruit fly)
104067519 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
104067519
NCBI-ProteinID:
XP_053921574
LinkDB
All DBs
Position
4:complement(65747732..65770822)
Genome browser
AA seq
1033 aa
AA seq
DB search
MSAGQQAPPPPPPDELPAPSANSGEPAGTAPATGDVEMEESFDDTSPGKQKEIQEADPTY
EEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSVGD
YRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGIN
GILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCL
IGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKL
SEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKL
VERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGK
LDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGS
RVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLSTR
AGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVER
AEMKLRLDSIVIQQGKLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDEDIDHILER
GAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEPPKRERKA
NYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKV
PRNPDLPNAAQAQKEDQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKW
GRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKA
LDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNS
PQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQKRKMDG
TPDGRGRKKKLKL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggggcagcaggcaccgccgccgccgccaccggacgagttgcccgcgccaagc
gccaacagcggcgagcccgcggggacggctcccgctaccggcgacgtcgagatggaggag
tcttttgatgatacatcaccaggaaaacaaaaagaaattcaggaagcagatcctacctat
gaagagaaaatgcaaacagacagagcaaacagatttgaatatctgttgaagcagactgag
ctgtttgctcatttcattcaacctgctgctcagaaaactccaacttcacctttgaaaatg
aagcctggacgtccacgaataaagaaggatgagaaacagaatttactgtcagttggcgac
taccgccaccgtaggacagagcaggaagaagacgaggagctgttaacagaaagctccaag
acaactaacgtctgcactcgatttgaagaatctccatcatatgttaaatggggaaagctg
cgtgattatcaggtccgaggactgaactggctcatctctttgtatgaaaatggcatcaat
ggtatcctagcagatgaaatgggtcttgggaagactctgcaaacaatttctcttcttggg
tatatgaaacactacaggaatattcctggccctcacatggttttagttccgaagtctact
cttcataactggatgaatgaattcaagagatgggtacctacacttcgagcagtttgcttg
ataggtgacaaagaccagcgagctgcctttgtcagagatgtgttgttgcctggagaatgg
gacgtgtgtgtaacgtcctacgaaatgcttatcaaagagaaatctgtattcaagaagttt
aactggagatacctagttatagatgaagcccacaggattaaaaatgaaaaatcaaagtta
tcagaaatcgtgagggaatttaagactacaaatcggctgctgttaactggaactccactt
cagaacaacttacatgaactctgggcacttcttaacttccttttgccagacgtctttaac
tcatctgaagactttgactcatggtttgatacaaacaactgtctaggggatcaaaagttg
gtggaacgtctccatatggtgctacgaccattccttttacgtcgcattaaggctgatgta
gagaaaagcttacctccaaagaaggaagttaaaatttacgtgggtctcagcaaaatgcaa
cgagaatggtatacacgaatcttaatgaaggatatagatatattgaattcagctgggaag
ctggacaaaatgagactgctgaatatcctgatgcagctgcgaaaatgctgcaatcatcca
tatctctttgatggagcggaacctggtccaccttatacaacagatatgcacttggtcacc
aacagtggcaaaatggtagtattggacaaactgctacccaagttgaaagaacaaggttca
agagtcttaatcttcagtcagatgaccagagtcctagatatcttggaagattactgtatg
tggcgaaattatgaatattgtagactggatggacaaacaccacatgatgagagacaggca
tctattaatgcatataatgaacccgggagctcaaaatttgtgttcatgttgagtacacgg
gcaggaggtcttggaatcaatttggctactgctgacgttgtaattttatatgattcagac
tggaatccacaagtagatctccaagccatggatcgagcgcatagaattggccaaacaaag
actgttcgagtgttcaggtttatcacagacaatacagtggaagaaagaatagtggaacgt
gcagaaatgaaactccgtctggattctatcgtcattcagcaaggcaaactggtggatcaa
aacctgaacaaacttgggaaggatgagatgctgcagatgattagacatggagcaacacat
gtgtttgcctccaaggagagcgagattacagatgaagatattgatcacattttggaaaga
ggtgcaaagaagactgcggaaatgaatgaaaaactttccaaaatgggtgaaagctcactc
aggaatttcacaatggatacggagtccagcgtgtataactttgaaggagaagactacaga
gaaaaacagaagatggcatttacagagtggattgaaccacctaaacgagaaagaaaagcc
aattatgcagtggacgcttacttcagagaggctcttcgagtcagtgagccaaaagcgccc
aaggcaccgcggcctccaaaacagccaaatgtacaggattttcagttctttcctccacgc
ctgttcgaactgttagagaaagagattctctactacaggaaaacaattgggtacaaggta
cctcgtaatccagatctgcccaatgcagctcaggcacaaaaggaagatcagctcaagatt
gatgaggctgaaccacttaatgatgaagaactggaagaaaaagagaagcttctaacccag
ggattcaccaactggaataagagagattttaaccagttcatcaaagctaatgagaagtgg
ggccgtgatgacattgagaatatagcacgagaagtagaaggaaaaacccccgaggaggtc
attgagtattcagctgtgttctgggaaagatgcaatgagctccaagacatagagaagatc
atggctcagatagaaagaggagaagccagaattcagagacgaatcagcataaaaaaggca
cttgatacaaagattggcagatacaaagcccctttccaccagctaagaatatcatatggt
actaataaagggaagaattacactgaagaggaggatcgcttcctaatctgtatgcttcac
aagctaggatttgataaagaaaatgtctatgatgaattaagacagtgtatccgaaactcc
ccacaattcagatttgactggtttctcaagtccagaactgcaatggagctgcaaaggaga
tgcaatactttaatcaccctgattgaaagagaaaacatggaactggaagaaaaggaaaag
gcagaaaagaaaaaacggggaccaaaaccatcttcggcacagaagcgcaaaatggatggt
actcctgatggtcgtggaagaaaaaagaagctaaagctgtga
DBGET
integrated database retrieval system
