Cuculus canorus (common cuckoo): 104067721
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Entry
104067721 CDS
T08597
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X2
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104067721 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104067721 (REXO1)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
Pre-60S particles
RNases
104067721 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
104067721
NCBI-ProteinID:
XP_009568802
LinkDB
All DBs
Position
27:complement(2962829..3006705)
Genome browser
AA seq
1219 aa
AA seq
DB search
MLCQHVASRPVPQAFAGVSWLYQADNESLEYSMNKYLQYLLTAESSERGYDPYNPELPRH
SLETEDGALSDIRDVAPGILELELVNKAIEAVKNEVEREQKKYEELLETTKELSASEASS
LISNTSVAGTENDSFASLEYNPGSYNFNNNSDYNPTPLAAASRSSKYTLDASRSKGSSLE
YVPKAVVQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYSARLLSKATTKESKGSKRGR
VPSYEESYSPSRKKLCEAPDDDEVCARFSSSEDEADAEYKPPSVSSRSRGGSESESNDGL
SSKEQSTKLDDFPSQDSKEVAAQRDVEDLPSSLKNLERNIAAKNAKMVKMCSGKKDQEIE
NKNKDSKDKTKRKKSDVIKAPGLGEGGKKEKSKSTEKDKVFKKEEKVKAKNEEKSSKDKS
GKVKSDGSLKKPEKHKSEKVDELKKEKSKSSSSGSGKSKSESVGKGSGVEKLGSNKKDSK
VKTAEVKNGKETSGHKSKDKGTKTPALERKKEKVGSTDKDPKEGRKQRSLSHVDLFGDES
GDDNDKGRPLPSTLLDVSSDSDDDDSSSDSESENEGAKKVKRSKLSKSSSSSSTSDDIDY
SILEKDLDFESDPMEECLRIFNESTDVKTEDKGRLGKQPSKEEGNEEKTEENLTTLFPGQ
KRRISHLVKQGNAEVPSKPVVRPYRPPTAQEVCYQRIQLAQQQAAQLAVAVQKASLSLPG
EKKRIAHVPNAAFSAAAKQSLASSKMSVPGKSVPPSNDSEAPTLSLKACTLAGMASKTTS
TVVQKRIAHVPSLQSTSLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLKFCSSSQEAFDK
ALSEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPSSTNKMSNKKVVSHEAVLGGKLA
AKTSFTLNRSGSLRSEDLTGAALYRRLKEYLMTEEQLKENGYPMPHPEKPGRAVLFTAEE
KKTLDSSCRICCRCGTEYMVSASGNCVRKEECVHHWGRLRKQRVPGGWETHYSCCSGAVG
SPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYTKQGLELTRVTVI
NSDLKVVYDTFVKPDSKVVDYNTRFSGVTEEDLKNTSITLRDVQAVLLNMFSADTILIGH
SLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQDNVEGHDSSEDA
RACMELMVWKIKEDAKVKR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtcagcacgtggccagccgtcctgtgccacaagcctttgccggagtctcttgg
ctctaccaagcagataatgaaagccttgagtacagcatgaacaaatatctgcaatatttg
ttaaccgcggagagctcagaacgaggctatgatccctacaatccagagcttccgaggcac
tcgctggagacggaggatggtgccttatctgacattagagatgtagcacccggtattctg
gagctggagctggtcaacaaggccatcgaggcagtcaaaaacgaagtggagagagagcag
aaaaagtatgaggagctgctagaaacgacaaaggagttgagtgcttcagaggcctcctca
ctcatttcaaatacgtctgttgctgggacagaaaatgattcgtttgcctccttagaatat
aatccaggtagctacaactttaataataactctgactacaaccctactcctctcgctgct
gctagccggtcaagtaaatacactttggatgcttcccgatcgaaaggaagctcactagaa
tatgttcccaaggctgtagtacagaataaaaaatacagtagcactgtcactaataataaa
tacgtaattgatgactctaagccttctacagacttggaatatgacccgctttcaaattac
tcagccaggcttttgagcaaagccacaacaaaggagtcaaaggggtctaagaggggtagg
gtgcctagttatgaggaatcctattctccgtcgcgaaagaagctctgtgaagcacccgat
gacgatgaagtgtgtgccaggttctcttcctccgaagatgaggctgatgcggaatataag
ccgccttctgttagctcacggtcaagaggcggttcggaaagtgaatcaaacgacgggtta
tccagtaaagaacagagcaccaaactggatgattttccttcccaggatagcaaagaagtg
gcagcgcaacgtgacgtggaagaccttccaagttcattgaaaaatcttgaaagaaacata
gcagccaagaatgcaaaaatggtgaaaatgtgttctgggaagaaggaccaggaaattgaa
aataaaaacaaagactcaaaagacaaaacgaaaaggaagaaatccgatgttattaaagca
cctggtcttggcgagggtggtaagaaggagaaaagtaaaagtacagaaaaagacaaagtg
ttcaagaaagaagaaaaagtaaaagccaagaatgaagagaaaagcagcaaagataaaagt
ggcaaagtgaaaagtgatgggagtttaaagaaacctgaaaaacacaaatcagaaaaagta
gatgagcttaagaaggaaaaatccaagtccagcagcagtggttcagggaaaagcaagagt
gagagtgtcggcaaaggctctggtgtggagaagctggggagcaacaagaaagactccaag
gtgaaaacggctgaggtgaaaaatggcaaggaaacctctggtcataaaagcaaagacaaa
gggaccaagacaccagcactggagcgaaagaaagaaaaggtcggttctacagacaaagat
ccaaaggagggtcggaagcagcggagtttgagtcacgttgacctgtttggtgatgagagt
ggagatgacaatgacaaaggccggcctttgccatccacattacttgatgtgagctccgac
tcagacgatgatgactctagttcagactctgaaagtgaaaatgaaggggcaaagaaagtg
aagcgctctaaattgtcaaagtcgtcatcatcttcctcaacatctgatgacattgattat
tccatccttgagaaagacttggactttgagtccgatccaatggaagagtgtctcaggatt
tttaatgaatctacagatgtgaaaactgaagacaagggaaggctggggaaacagccatcc
aaagaggaaggaaatgaagaaaagacagaagagaatttaactaccttgtttcctggccaa
aaaagaaggatctctcatcttgtcaaacaaggaaatgcagaggtcccgagcaagcccgta
gtgcggccgtaccgcccgcccaccgcacaggaggtctgttaccagaggatccagctggct
cagcagcaggcggcacagctggctgtggccgttcaaaaggcctctctttctttgccagga
gaaaagaagaggattgcacatgtgccaaatgcagccttttctgcagcagccaagcaaagc
ctcgctagtagcaagatgtctgttcctggcaagagtgtcccaccctccaatgactctgaa
gcacccaccctgtctctgaaggcttgcaccttagctgggatggcttcaaagaccaccagc
accgtcgtgcagaaaaggatagcgcatgttccctccttacagagcaccagcttacagagg
cctgttattcccacagaatttggtgctaaagtcccaacaaacattcgtcaaagatatctc
aatctcttcatcgatgagtgcctgaagttctgctcctcctcccaggaagcgtttgacaag
gctctgtcagaagagaaggtggcttatgaacgtagcaccagtcgcaatatctacctgaat
gtggcagtgaacaccttaaagaagctccgaagccttgtgcccaattccccgtccagtacg
aacaagatgagtaacaagaaagtggtgtcccatgaagctgtgctgggagggaagcttgct
gctaagacaagctttactctaaaccggtcagggagcttgagatcagaggatttaacagga
gctgccttgtaccggcgcctaaaggagtatctgatgactgaggagcagctcaaggaaaat
ggttacccaatgcctcacccagagaagcccggtcgtgccgtcctcttcactgcagaggag
aagaaaacgcttgactcctcttgcaggatttgttgtcgctgtggcaccgagtacatggtc
tcggcctctggaaactgcgttcgcaaagaggaatgtgtccatcactggggacggctgcgc
aagcagagagtgccaggtggatgggaaactcattacagctgctgctcaggagctgtgggt
tcaccaggctgccaggttgctaaacaacacgtccacgacgggcggaaggagagccttgat
ggctttgtgaagacttttgagaagttgcctacgactgatggctaccctggaatctacgcg
ttggactgtgagatgtgctacacgaagcaaggactggagctgacacgagtaactgtgatc
aactctgaccttaaagtggtatatgacaccttcgtcaaaccggactccaaggtggtggac
tacaacaccagattctcaggtgtgacagaagaagacctgaagaacactagtatcaccctg
cgggatgtccaagccgtcctactgaacatgttcagtgcagataccatattgatagggcac
agcttggaaagcgacttatttgcactaaagcttatccatggcacagtggtggatactgcg
attgtctttccccaccggctgggattgccttacaagcgggctctccggacgctgatggct
gactacctcaagcgcatcatccaggacaatgtggaagggcacgactccagtgaggatgcc
agagcttgcatggagctgatggtctggaagatcaaagaagatgctaaagtgaaacgatga
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