Cuculus canorus (common cuckoo): 104067783
Help
Entry
104067783 CDS
T08597
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104067783 (TRUB1)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104067783 (TRUB1)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104067783 (TRUB1)
Prokaryotic type
104067783 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104067783
NCBI-ProteinID:
XP_053927990
LinkDB
All DBs
Position
7:complement(4679440..4709866)
Genome browser
AA seq
283 aa
AA seq
DB search
MAAGEAALGKAAEKLFSLSGLFAVYKPKGPTSAGVLNQLRERLLAEAGVQTNENKRNKVL
KIGHGGTLDSAAAGVLVVGIGKGTKMLKTMLAGSKKYTAIGLLGKATDTLDATGRVTEEK
PYDQITKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVKVYS
ISLQQFQPPLFTLDVECGGGFYVRSLVNDIGKELSTCATMQELTRTKQGPFTLEEHVLYE
DKWTIDEIARSLEHCTSLLPGEPSHKKLKTEHPGETALSCEDK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggagaggcggcgctgggcaaagcggccgagaagctcttctccctcagcggg
ctcttcgccgtctataagcccaagggtcccacctctgccggcgtgctcaaccagctgagg
gaaaggctgctggcagaagctggcgtgcaaacaaatgagaacaaaagaaacaaggttttg
aaaattggacatggtggaactttggacagtgcagcagcaggagttctggtggttggtatt
ggaaaaggaacgaaaatgctgaaaactatgttggcaggttccaagaagtacactgccatt
ggactcctgggcaaagctactgatacattagatgctacaggaagagtaactgaagaaaaa
ccttatgaccaaataacaaaaggagatcttgagaatgtgctgcaaaagttcacaggggac
atcatgcaggttcctccactctattctgctttgaagaaggatggagaaaggctatcaact
ctaatgaagagaggagaagcggttgaagcaaagcctgctcggccagtaaaagtgtacagc
atctctctccaacagttccagccaccactgttcacactggatgttgaatgcggcggtggc
ttttatgtcaggagcctggtcaatgacattggcaaagaactctctacctgtgccactatg
caagagctgacccggaccaagcaggggccgtttacgctagaggaacatgtcctttatgaa
gacaaatggacaattgatgaaattgcacgatccttagagcattgcacgtctctcctccca
ggagagccatctcataaaaaattgaagacagagcatccaggtgaaactgctctgagctgt
gaagataagtga
DBGET
integrated database retrieval system
