Cuculus canorus (common cuckoo): 104067865
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Entry
104067865 CDS
T08597
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
cuca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104067865 (CASC3)
03015 mRNA surveillance pathway
104067865 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104067865 (CASC3)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104067865 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104067865
NCBI-ProteinID:
XP_053944062
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All DBs
Position
25:2307947..2322356
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AA seq
716 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSGDSAASAARSRSASGSQSGSPHRPPRRGSAGALGTG
PRGRGAESAAGGAAKSQAESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVEL
KQDSNGSCESAAKAEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDED
RKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQE
LIALYGYDIRSAHNPDDIKPRRMRKPRFGSPQRDPNWSNERPNKPPRHQGPDSTSAPPRT
FTNRSSAGTGRMPPPRNYPRMGGYKESRPGYRTSEASVQHLSRNGEQTKHESSYRVKRAE
QTPPRDKSPEMEAAHVHSSPVKEEIALENQAAAADATQPPPDRPIEKKSYSRARRTRIKA
GDAGKLPDEVPASEGLTPVPPKPAQAETSPPPAKSSNWESPVESNLDGLEQEMTQMNLAE
QNWTPGQSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPE
PAPPMHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAP
MANPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSN
TQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcaacgcgcctcgcaggacagcgaggacgattcggattccgcc
gcctccgacagcggcgattcggccgccagcgctgcccgttcccgttcggcatccggatcg
caatccggttcgcctcaccgaccgcctcggcggggctcggccggggccctcggaacgggg
cctcggggccgcggggccgagagcgcggccgggggagcggccaagagccaggccgagtcc
gagtgtgaaagcgaggatggcattgaaggagatgctgtgctctcagattatgaaagcgct
gaagactcagaggccgaggaagaggattacagcgaggaagaaagtgccaaagtggaactg
aagcaggatagtaatggttcctgtgagtcagcggcaaaagcagagaaaggggatgagaaa
cccgactccaaaggcgcggtgactggcgagaggcaaagcggcgatgggcaggagagcact
gagcctgttgagaataaagtggggaaaaaggttcccaagcacctggatgatgacgaggat
cggaagaacccagcttacatcccacgtaaagggcttttctttgagcatgacctgcgaggg
cagacgcaggaggaggaggtcaggccaaaaggtcgtcagcggaagctgtggaaggatgag
ggccgctgggagcacgacaaattccgggaggatgagcaggcccccaaaaccaggcaggag
ctgattgcgctttatgggtatgatatcaggtcagctcacaacccagacgacatcaagccg
aggaggatgcgcaaaccgaggtttgggagtcctcagcgagacccaaactggtccaacgag
aggccaaataagcccccaaggcaccagggtccagacagcacttctgctcctccacgaacc
ttcaccaacaggagctccgcggggacggggaggatgccaccgcctaggaactacccgagg
atgggtggctacaaagagagccgtccaggctaccgaacttcagaagcaagcgtccagcat
ctgtctcgaaacggtgaacaaacgaaacatgagagcagctatcgagtgaagcgtgcagag
caaaccccaccgagagataagtcacccgagatggaagcggcgcacgtccacagcagccct
gtgaaggaggagattgctttggaaaaccaagccgctgctgctgacgctacacagccacca
ccagacagaccaattgaaaagaaatcttattcccgggcaagaaggaccagaatcaaagct
ggggatgcagggaagctgcctgatgaagtacccgcttcggaagggctgactcctgtgcct
ccaaaacccgcgcaagctgagacgtcccccccaccagccaagagcagtaactgggagtcg
ccggtagaatccaacttggatggactcgagcaagagatgacccaaatgaatcttgccgag
cagaactggacaccggggcagtctcagttcattcagccccgggagctgaggggtatccct
aaccatatgcacgtgggaactgggccaccgcctcagtttaacaggatggaggaaatggcg
gtgcaggggggccgtgtgaaacgctactcgtcgcagcggcagagaccaccggtgccggaa
cctgctcctcccatgcacatcagcatcatggaagggcactactacgacccactccaattc
cagggaccaatctacacccacagtgagaatccagccccgctaccaccccaagggatgatc
gtacagccagaaatgcacctccctcatccaggcttacatccccaccagacgccagccccc
atggcaaaccctgggctgtaccctccgccagtctccatgcccccaggccagcccccaccg
cagcagctgcttgcgccgacttacttctcccctcctggagtcatgaattttgggaatcct
ggctatccctatcccccaggagcactaccccctccgccccctcctcatctctattccaac
acgcaggcccagtcccaggtctatggaggagtcacctactacaacactgtccagcagcaa
gtgcagcccaagccttctccgcctcgaaggacatcccagcctgtgaccatcaagccaccg
cctcccgaggacagcaaaggtgaaaaatcaaaggaaagaagcaacacgtag
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integrated database retrieval system