KEGG   Cuculus canorus (common cuckoo): 104067865
Entry
104067865         CDS       T08597                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
cuca  Cuculus canorus (common cuckoo)
Pathway
cuca03013  Nucleocytoplasmic transport
cuca03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104067865 (CASC3)
   03015 mRNA surveillance pathway
    104067865 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cuca03019]
    104067865 (CASC3)
Messenger RNA biogenesis [BR:cuca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104067865 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 104067865
NCBI-ProteinID: XP_053944062
LinkDB
Position
25:2307947..2322356
AA seq 716 aa
MADRRRQRASQDSEDDSDSAASDSGDSAASAARSRSASGSQSGSPHRPPRRGSAGALGTG
PRGRGAESAAGGAAKSQAESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVEL
KQDSNGSCESAAKAEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDED
RKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQE
LIALYGYDIRSAHNPDDIKPRRMRKPRFGSPQRDPNWSNERPNKPPRHQGPDSTSAPPRT
FTNRSSAGTGRMPPPRNYPRMGGYKESRPGYRTSEASVQHLSRNGEQTKHESSYRVKRAE
QTPPRDKSPEMEAAHVHSSPVKEEIALENQAAAADATQPPPDRPIEKKSYSRARRTRIKA
GDAGKLPDEVPASEGLTPVPPKPAQAETSPPPAKSSNWESPVESNLDGLEQEMTQMNLAE
QNWTPGQSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPE
PAPPMHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAP
MANPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSN
TQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq 2151 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcggcaacgcgcctcgcaggacagcgaggacgattcggattccgcc
gcctccgacagcggcgattcggccgccagcgctgcccgttcccgttcggcatccggatcg
caatccggttcgcctcaccgaccgcctcggcggggctcggccggggccctcggaacgggg
cctcggggccgcggggccgagagcgcggccgggggagcggccaagagccaggccgagtcc
gagtgtgaaagcgaggatggcattgaaggagatgctgtgctctcagattatgaaagcgct
gaagactcagaggccgaggaagaggattacagcgaggaagaaagtgccaaagtggaactg
aagcaggatagtaatggttcctgtgagtcagcggcaaaagcagagaaaggggatgagaaa
cccgactccaaaggcgcggtgactggcgagaggcaaagcggcgatgggcaggagagcact
gagcctgttgagaataaagtggggaaaaaggttcccaagcacctggatgatgacgaggat
cggaagaacccagcttacatcccacgtaaagggcttttctttgagcatgacctgcgaggg
cagacgcaggaggaggaggtcaggccaaaaggtcgtcagcggaagctgtggaaggatgag
ggccgctgggagcacgacaaattccgggaggatgagcaggcccccaaaaccaggcaggag
ctgattgcgctttatgggtatgatatcaggtcagctcacaacccagacgacatcaagccg
aggaggatgcgcaaaccgaggtttgggagtcctcagcgagacccaaactggtccaacgag
aggccaaataagcccccaaggcaccagggtccagacagcacttctgctcctccacgaacc
ttcaccaacaggagctccgcggggacggggaggatgccaccgcctaggaactacccgagg
atgggtggctacaaagagagccgtccaggctaccgaacttcagaagcaagcgtccagcat
ctgtctcgaaacggtgaacaaacgaaacatgagagcagctatcgagtgaagcgtgcagag
caaaccccaccgagagataagtcacccgagatggaagcggcgcacgtccacagcagccct
gtgaaggaggagattgctttggaaaaccaagccgctgctgctgacgctacacagccacca
ccagacagaccaattgaaaagaaatcttattcccgggcaagaaggaccagaatcaaagct
ggggatgcagggaagctgcctgatgaagtacccgcttcggaagggctgactcctgtgcct
ccaaaacccgcgcaagctgagacgtcccccccaccagccaagagcagtaactgggagtcg
ccggtagaatccaacttggatggactcgagcaagagatgacccaaatgaatcttgccgag
cagaactggacaccggggcagtctcagttcattcagccccgggagctgaggggtatccct
aaccatatgcacgtgggaactgggccaccgcctcagtttaacaggatggaggaaatggcg
gtgcaggggggccgtgtgaaacgctactcgtcgcagcggcagagaccaccggtgccggaa
cctgctcctcccatgcacatcagcatcatggaagggcactactacgacccactccaattc
cagggaccaatctacacccacagtgagaatccagccccgctaccaccccaagggatgatc
gtacagccagaaatgcacctccctcatccaggcttacatccccaccagacgccagccccc
atggcaaaccctgggctgtaccctccgccagtctccatgcccccaggccagcccccaccg
cagcagctgcttgcgccgacttacttctcccctcctggagtcatgaattttgggaatcct
ggctatccctatcccccaggagcactaccccctccgccccctcctcatctctattccaac
acgcaggcccagtcccaggtctatggaggagtcacctactacaacactgtccagcagcaa
gtgcagcccaagccttctccgcctcgaaggacatcccagcctgtgaccatcaagccaccg
cctcccgaggacagcaaaggtgaaaaatcaaaggaaagaagcaacacgtag

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