Cuculus canorus (common cuckoo): 104067918
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Entry
104067918 CDS
T08597
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104067918 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104067918 (SEC24C)
Membrane trafficking [BR:
cuca04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104067918 (SEC24C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
104067918
NCBI-ProteinID:
XP_053926780
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All DBs
Position
7:21399707..21434832
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AA seq
1168 aa
AA seq
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MSVNQQAHTGPPYGQPQPGYQGYQQPAYGGQPLPGVPQSPYGAYNGPMPGYQQPVPPQGY
FPSLGFPSKGCPVSLNSDTSLAPNFIGSLRAPPTSEAPPPASGVSLPSGHLAYSQFGQGD
VQNGIPTSAAQMQRPPASQPFPPGSAPSPIRQTSAFQQYGPTTAGVQQLSNHMAGMTISS
AAAAAPPPAGLGYGPPTSVPPVSGSFSAAGSGHYTPYTATQGPPPTSVSQDLPLAQPPFP
GQPMPAQRLPAPAPGFPPPPSSYPPTTVASRPPAMPGPPLPGQTVAGPPAAQPNHVSSPP
PPSAMAGPHSGPPMRGLHGPPPPTHPAQPGYQMQQNGSFGQMRGPQPNYGGGYPGTPHYG
TQPGPPPPPKRLDPDSIPSPQLNELPPQQKPRHRIDPDAIPSPIQVIEDDRSNRGSEPFV
TGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQSQVPLAAVIKPLAALP
PEETLPYLVDHGESGPVRCNRCKAYMCPFMQFIEGGRRFQCCFCSCVTEVPPHYFQHLDH
TGKRVDFYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAVKSGLVRLICEE
LKSLLDYLPREGNMEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDG
FLVNVNESRTVIASLLDQIPEMFADTRETETVFAPVIQAGLEALKAAECAGKLFIFHTSL
PIAEAPGKLKNRDDKKLINTDKEKTLFQPQTSFYNNLAKDCVAQGCCVDLFLFPNQYLDV
ATLGVVTFQTGGSIYKYAYFQLETDQDRFLNDLRRDVQKEVGFDAVMRVRTSTGIRATDF
FGAFYMSNTTDVEMAGLDCDKTITVEFKHDDKLSEDSGALLQCALLYTSCAGQRRLRIHN
LSLNCCTQLADLYRNCETDTLINYLAKYAYRGVLSSPVKAVRDALISQCAQILACYRKNC
ASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGPEVTTDDRAYIRQLVTSMDVAETNVF
FYPRLLPLTKADVDSDSLPAAIRNSEERLSKGDIYLLENGLNIFVWVGVNVQQGLIQNLF
GVSSFSQISNTLSTLPVLENAFSKKVRSIVSMLQMQRSRYMKLIIVKQEDKLEMLFKHFL
VEDKSLSGGASYVDFLCHMHKEIRQLLS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaaccagcaagctcacacagggcctccttatgggcaacctcagcctggatat
cagggataccagcagcctgcgtacggaggacagccgttgccgggggttcctcagtcaccg
tatggagcttataatggtccgatgccaggatatcaacagccagtccctccacaaggttac
tttccttccttggggttcccctcgaagggctgtcctgtatctctcaactctgacacttct
cttgcacctaatttcataggttccttaagagcccctccaacatccgaagccccccctccg
gcctctggagtatctcttccttctgggcacctggcatacagccagtttggacagggggat
gtgcagaacggaattccaacctcggcagcccagatgcagcggccacctgcttctcagccg
tttccgccaggctcagcaccctcacctatcagacagacatctgcgttccagcaatacggt
cccaccacagctggcgtgcagcagctcagcaaccacatggcagggatgaccattagcagt
gcagctgctgctgctcctcccccagctggactgggctacggtcccccaacatcggttccc
ccagtctcaggaagcttcagtgcagcaggatctggtcattacacaccctacacggcaacg
caaggaccccctcccaccagtgtgtctcaggaccttcctctggcacagcctccgttccct
ggtcagcccatgccggctcagcgtctgcctgctccggcccctggttttccccctcctccc
tcctcttacccccctaccacagtcgcttcaaggccgccggccatgccaggccctccgctg
cctgggcagaccgttgctggaccaccagcggcccagcctaaccacgtgtcctcaccaccg
cctccatcagccatggcagggccacactcagggcctcccatgagaggcctccatggacca
cctcctcccactcatcctgctcagccaggataccaaatgcagcagaacggttcgtttggg
cagatgaggggtccccaaccaaactatggaggaggctatccaggaacaccacattatgga
actcagcccggaccaccgcctccgccaaaacgcttggatccagattccattcctagccct
caacttaatgagctgccaccccagcagaaacccaggcacagaatagacccagatgcaatt
cctagtccaattcaagtgattgaagatgacagaagtaaccgtgggtcagaaccgtttgtc
actggagtgagagggcaagtcccacctcttgtaactacaaatttcttggtcaaggatcaa
ggcaacgcaagcccccgctacataagatgcacatcttacaatattccctgcacctcagac
atggccaaacagtcccaagttcccctggctgctgtcataaaaccactggctgctctgccc
ccagaggagacccttccttacttggtagatcatggagagtctggccctgtccgatgcaat
aggtgcaaggcttacatgtgcccttttatgcaattcatcgagggcggaaggaggttccag
tgctgtttctgcagctgcgtcactgaggtgccacctcactatttccagcatttggatcat
actggaaagcgggtagacttctatgataggcccgagttatcactgggatcttacgagttt
ctagcaacagttgactattgcaagaataacaagtttcctagtccccctgctttcattttc
atgattgatgtgtcctacaacgctgtgaagagtggcttagtgaggctaatatgtgaagaa
ttgaagtcactcctagattacctccccagggaaggcaacatggaagaatcagccattcga
gttggctttgtcacctacaacaaggtgttacacttctataatgtgaagagctcactggca
cagccacaaatgatggttgtctcggatgtggcagatatgtttgtgcctctcctcgatggt
tttctggtgaacgtgaatgagtccaggacagtgattgccagtttgctggaccagattcca
gaaatgtttgcagacacgagagaaacggaaactgtttttgcacctgtgattcaagcaggg
ctggaggcgctgaaggcagccgagtgtgctggcaagctcttcattttccacacctctctg
cccattgcagaggcccctggaaagttaaagaacagggatgataagaaactgatcaacaca
gataaggagaagactttgtttcaaccacagacaagcttttacaacaatttggccaaggac
tgcgtggcccagggctgctgtgtggatctcttcctgtttccaaaccagtatttggatgtg
gcaacactaggtgtagtaaccttccagacaggaggctccatctataagtatgcgtatttc
cagctggagacagaccaagacaggttcctaaatgacttgagaagagatgtccagaaggaa
gtgggatttgatgctgtaatgagagtgcgcacaagcacaggtattcgagcaactgacttt
tttggagctttctacatgagcaacacaacagatgttgaaatggccggtttagactgtgat
aaaacaatcacagtggagttcaagcatgatgacaaactgagcgaagatagtggtgcactc
ctccagtgtgctctgttatatacaagttgtgcaggacagcgacgactccgcattcacaac
ctctccttaaactgctgcacgcagcttgctgacctctatcgaaactgtgagacagacacc
ctcatcaattacttggctaaatatgcatatcgtggagttctgagtagtccagtaaaggct
gtacgagatgcactgatcagccagtgcgcccagatccttgcttgctatcgaaagaactgt
gctagtccctcttcggctggccagctgatcctccctgaatgcatgaagctgcttcctgtg
tacttgaattgtgtgttgaagagtgacgtccttcagcccggtccagaggtcacaacagat
gaccgtgcctacattcgtcagttggtcacatccatggatgtggcagaaacaaacgttttc
ttttatcccaggcttttgcctctgaccaaagcagatgttgacagtgactccttgccagca
gcaatccggaactcagaggaacgtctctccaagggtgacatttatctgttggagaatggg
ctgaacatctttgtgtgggtgggagtcaatgtgcagcaaggcctgatccagaatctcttt
ggagtgtcatccttcagtcagatcagcaacaccttgagtaccctgcctgtcttggaaaac
gccttttcaaagaaagtacgatctattgtcagcatgcttcaaatgcagagatcccgctac
atgaagttaataattgtgaagcaagaagataagctagagatgctgttcaaacacttcctg
gtggaggacaagagcctgagcgggggtgcttcctatgtggacttcctgtgtcacatgcac
aaggagattcggcagctactgagctag
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