Cuculus canorus (common cuckoo): 104067940
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Entry
104067940 CDS
T08597
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104067940 (BTAF1)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104067940 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_MROH2B_C
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_GCN1_C
HEAT_GCN1
HEAT_GCN1_C_2
ARM_TBCD_2nd
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
104067940
NCBI-ProteinID:
XP_053927481
LinkDB
All DBs
Position
7:16494170..16538495
Genome browser
AA seq
1846 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPTPRSKQEPGSESPMEDSPSTDRLRFDRFDICRLLKHGASLLG
SAGAEFEIQDDKSGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYSPSS
VSLVNKQPTLQAAEFIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDG
EPEEKRRKVANVVINQPATDSKTLVENAPEEANEWPLESFCEEVCNDLFNPSWEVRHGAG
TGLREILKAHGKSGGKMGDSSLEEMLQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQDMINT
LLPKVLPAIVEGLQDLDDDVRAVAAASLVPVVESLVQLQSQKVPFILNTLWDALLELDDL
TASTNSIMILLSSLLTYPQVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQSSSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKASVQYVVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKTRSKEKAGAKLRQGQTQNKEVIQEYIAGAESIAED
PATRDYIVMRARMMAAKLLGALCCCICDPGVNTVSQEIKPAESLAQLLLFHLNSKSALQR
ISVALVICEWAALQKECTTVALCVQPRLLGVLSEHLYYDEIAVPFTRMQNECKQLISLLA
DANIDIGNRVNCSVFTIDQANELVTSVFNEVTSSFTLNPKILQQLDSKRQQVQMTVTETN
QEWQLLHLRVHTFAACAVVNLQQLPEKLNPVIKPLMEAIKKEENTLVQNYVASCIAKLLQ
QCTTRSPCPNSKIVKNLCNSLCVDPHLTPLAACPAQPQGGHENSKGPNSDKDGMHHTVTK
HRGIITLYRHQKAAFAITSRRGPTPKAPKAPIADLPTGSSGSIPAELDEAQKPYVVQRRG
AEFALSTIAKHFGAEMATGLPHLWDAMVGSLRNNIHTNNFDRKSLLEKGDAPAQELVNSL
QVFETTAASMDAQLHPLLIQHLLHLYMCLQHPSTAVRHMAARCVGVMSKIATMETMNVFL
EKVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMA
TQCFATLIRLMPLEAGIPDPPNMSEELIRMKAKERHFLEQLLDGKKLENYKIPVPIKAEL
RKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARTKLVDSVP
LPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKRHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCVLSPLQVQLYEDFAKSRAKCDIDETVSSISLNEETEKPKLKATG
HVFQALQYLRKLCNHPALVLTTQHPEYKRITEQLAAHNSSLRDIQHAPKLSALKQLLLDC
GLGNGGSSESGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENTSLQSMGTEQLLDLFTLDKDGKT
EKADTSTSSSSGKASMKSVLENLGELWDQEQYDTEYNLENFMHSLK
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccaggcttgatcgtctctttattttactggacaccggtacaacaccagta
acaagaaaagcagctgcacagcaacttggagaagtagtgaaactgcatcctcatgaactg
aataatctcttatctaaagtgttggtgtatttaagaagtacaaattgggatactcgtatt
gcggctggccaggctgttgaagcaatagtgaaaaatgtaccagagtggaatccaactcca
agatcaaaacaagaaccaggctcagagagtcctatggaagattcaccttcaacagatcgg
ttgcgttttgacagatttgatatatgtcgattgttaaaacatggtgcatctcttcttgga
tctgctggtgctgaatttgaaatccaagatgataaatcaggtgaaattgatcctaaagag
aggatagcacgacagaggaagctgttacaaaagaaacttggcttagacatgggtgctgca
attgggatgaatactgaagatctcttcaatgatgaagatctggactattctccttcttcg
gtttcactagttaacaaacaacctactcttcaggctgcggagttcattgactcagaattt
cgagctggtatgagcagtagacaaaagaataaagccaaaagaatggctaagctatttgca
aagcaaagatccagagatgcagtggaaactaatgagaagagtaatgatagcactgatggg
gaaccagaagaaaagagaagaaaagttgcaaatgttgtcatcaaccagcctgccacagac
tcaaaaacattggtagaaaatgctccggaagaggcaaatgaatggcctctggaaagcttc
tgtgaggaggtgtgcaatgatctctttaacccttcttgggaggtgcgacatggtgcaggc
actggactgagagagatacttaaagctcatggtaaaagtggtggtaaaatgggagatagc
tctttagaagagatgcttcagcagcatcaggagtggctagaagacttggttattagactt
ctttgtgtgtttgcattggacagatttggagactttgtttcagatgaagtggtagcacca
gtacgtgagacttgtgcccagactttgggcgtagtattgaaacacatgaatgagactgga
gttcataaaaccgtggatgttctcctgaagctgcttacacaggaacagtgggaagtaaga
catggtggtctcctgggaataaagtacgctttggcagtgcgtcaggacatgatcaacacc
ttattgccaaaagttttgcctgcaatagttgaaggtctccaagatctggatgatgatgtc
cgagctgttgctgctgcatctttggtaccagtagtggaaagcctagtccaacttcagtct
cagaaggtgccttttattctcaatactttgtgggatgcacttctggagctggatgacttg
acagcttccacaaacagtatcatgattcttctctcttcacttctgacttatcctcaggtc
cgcaaatgcagtattcagcaatcactcacagttttggtcccacgtgtgtggccgttcttg
catcatactatatcttctgtgcgaaaagcagcattggaaacattattcacactgctgtct
acccaagaccagagctcttcaacatggctgactccaattctgcaagacatgttgaggcac
atatttcaattttgtatcttagaaagcaaccaagaaattctggatcttattcacaaggtg
tggctggaactgctaaacaaggcatctgtacagtatgtggttgcagctgcttgtccgtgg
atgggagcctggctctgcttaatgatgcagccatctcatttgcccattgacttaaatatg
ttgctagaagtaaaaaccagatcaaaagaaaaggcaggcgctaaactgcgtcaaggtcaa
acccagaataaggaagtgattcaggaatatattgctggggcagagagcattgcagaagat
ccagcaaccagggattatattgtcatgcgagctcggatgatggcagcaaagttgctggga
gcactttgttgctgtatttgtgacccaggtgtaaatactgttagtcaagaaataaagcca
gctgaatcattagctcagctactgctcttccacttgaattctaaatctgctttgcagagg
attagtgttgcgttagtgatctgtgagtgggcggccttgcaaaaggagtgtacaactgtg
gctctttgtgtgcaaccccgtttacttggggtcctttctgaacacctctattatgatgaa
attgctgttccttttacacggatgcagaatgaatgtaaacaactcatctcactgttagct
gatgcaaacattgacattggaaacagagtaaactgcagtgtatttacaatagatcaagct
aatgaactggttacttctgttttcaatgaagtgacatcatcctttactttgaatcctaaa
attctacagcagttggacagtaaacgacaacaagtccaaatgactgtaacagaaacaaat
caagaatggcaattgttgcatctgcgtgtccacacatttgctgcgtgtgcagttgtgaac
ttgcaacaacttccagaaaaactaaatcctgttattaaacctctaatggaagctatcaaa
aaagaagagaatacacttgtacaaaactatgtggcttcatgtatagcaaagttacttcag
cagtgcacaacaagatctccttgtcccaactcaaagattgtaaagaatctctgcaactcc
ctctgtgtggatccacatcttacccctctagcagcatgtcctgcacagcctcagggtggt
catgagaactcaaaaggccccaactctgataaagatgggatgcatcatacagttactaag
cacaggggaataattacactgtacagacatcagaaggctgcttttgccatcacaagtcgg
cgaggtcctactccaaaagctccaaaagctccaattgcagatctccccactggcagtagt
ggaagcattcctgcggaacttgatgaggctcagaaaccgtacgtcgtacagagaagagga
gcagaatttgccttatctaccatagctaaacattttggtgctgaaatggcaacaggattg
ccacatctctgggatgctatggttggatcattaaggaacaacattcacacaaataatttt
gaccgaaagtccttactggaaaaaggagatgctcctgcccaggagctagtaaattcttta
caggtttttgaaacaacagcagcttcgatggatgctcagctacatcctctgttaatacag
catttgcttcatctttatatgtgccttcaacatcccagtactgcagtgagacacatggct
gctcgttgtgtaggtgttatgagcaaaatagctaccatggaaacaatgaatgtctttcta
gagaaagttctaccctggctgggagcgatagatgacaacaccaaacaagaaggtgcaatt
gaagcacttgcctgtgtaatggagcagctggatgttggtattgttccatacattgttctt
ctggtggttccagttctgggtagaatgagtgatcagacagacagcgtacgtttcatggct
actcagtgctttgcaacgctgattagactcatgcctcttgaggctggtataccagatcca
ccaaacatgtctgaagaattaatccgaatgaaggctaaagaacgtcactttctggaacaa
ttattggatggaaaaaaactggaaaactataaaattccagtaccaatcaaagcagaactc
agaaaataccagcaggatggagtgaactggctggcatttctcaataaatacaaactccat
ggaattctatgtgatgacatgggcttagggaaaactttacaatccatttgcattcttgca
ggtgatcattgccacagggctcaggaatatgcaagaacaaaactggtggacagtgttcct
cttccctccttggtggtgtgccctcctacgctcactggacactgggtggatgaagtgggc
aaattttgctcaaaagaatatcttaatcctttgcactatacgggacctcctaccgagaga
gcaagattacagcaccaggtgaaaagacacaatcttatagtggcttcatatgatgttgtg
agaaatgacattgacttcttcagaaatattaagtttaattactgcattcttgatgaaggc
catgtaataaaaaatggaaagacaaagctgtcaaaagcagtaaaacagttgactgccaat
tacaggataattctttctgggacacctatccagaacaatgtcttggagttgtggtcgttg
tttgacttcctcatgccaggatttttgggtaccgaacgccaattcgcagctcgttacggc
aaacccatactggcaagcagagatgcccgaagctccagtcgagagcaagaggctggtgtt
cttgcaatggaagcactacaccgccaagttctgccattccttctaaggagaatgaaagag
gatgtactgcaagatcttccacccaaaattattcaagattattactgtgttctcagtcct
ctacaggttcagctttatgaagattttgccaagtctcgtgccaaatgcgatattgatgaa
acagtgtcttcaatttcactgaacgaagaaactgaaaaaccaaaacttaaagctacaggt
catgtatttcaggcattgcagtacttacggaagctgtgcaaccatccagcattagtgcta
acaactcaacatccagaatataaaagaattacagagcaactagcagctcataattcatct
cttcgagatatccagcatgcacccaagctgtctgctttaaaacaactgctgctagactgt
ggtttggggaatggtggctcctcagaaagcggtacagaagctgtagtggcccagcacaga
gtacttatcttctgtcaacttaaaagtatgttggatatagtggagcatgaccttctgaga
cctcagttaccttcagttacttatttacgactagatggcagtatacctgctggccagagg
cattccattgtttcccggttcaataacgacccatctatagatgttcttttgctcaccact
catgttggtgggttgggacttaacttaacaggtgctgatacagtagtatttgttgaacat
gactggaatccaatgagagatctgcaagccatggatcgggcacatcgcattggacagaaa
cgtgttgttaatgtatatcgcctgataacaaggggaactttggaggagaagatcatgggt
cttcaaaagttcaaaatgaatattgctaatacagtgattagccaagaaaacacaagcctg
cagagcatgggaacagaacagcttcttgatctgttcactcttgacaaggatggaaaaact
gaaaaagcagatacctctacctcttcctcatctgggaaagcatcaatgaaatcagtactc
gaaaaccttggagaactatgggatcaagaacagtatgacactgaatacaatcttgaaaac
tttatgcattcattaaagtaa
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