Cuculus canorus (common cuckoo): 104067993
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Entry
104067993 CDS
T08597
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
104067993 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104067993 (KCNMA1)
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
104067993 (KCNMA1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
BNR_3
Motif
Other DBs
NCBI-GeneID:
104067993
NCBI-ProteinID:
XP_053928113
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Position
7:complement(23463824..23890895)
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AA seq
1288 aa
AA seq
DB search
MANGSGIRMSSSINANNLNTDSSSSPVNVPKMDALIIPVTVEVPCDSRGQRMWWAFLASS
MVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGACKPTDEKEENVA
AEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPIESCQNFYKDF
TLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRF
LRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQN
NQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGN
RKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELE
ALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIK
NYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAPGLSTMLA
NLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELVFAKLKLLMIAI
EYKSEKRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKR
IKKCGCKRPKMSIYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLERAFPLSSVSVNDC
STSLRAFEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQIDNMDANVKKY
DSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNF
HYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSAN
QNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLLR
QPSITTGANIPIITELAKPGKLLPLVSISQEKNSGTHILMITELVNDSNVQFLDQDDDDD
PDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENA
LRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLR
DAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSYSSSK
KSSSVHSIPSTANRPNRTKTRDSREKQNATRMNRMGQAEKKWFTDEPDNAYPRNIQIKPM
STHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcattagaatgagtagcagtatcaacgccaacaatctcaacaca
gactcgtcctcctcccccgtcaatgtgcccaagatggatgctctaatcatcccggtgacc
gtggaggtgccctgcgatagccgcggacagcggatgtggtgggctttcctcgcctcatcc
atggtcactttctttgggggactctttatcatcctgctctggaggaccctcaagtacctg
tggactgtctgctgccactgcggggtcaaaaacaaggaagcccagaagatcaacggtggt
ggagatacacaggcagatggggcctgcaaaccaacagatgagaaagaggagaatgtggca
gcagaagtgggatggatgacctccgtgaaggactgggcaggagtcatgatatctgcacag
acattaactggcagagtacttgttgtcttagtcttcgctcttagtattggtgctcttgta
atatacttcatagattcgtcaaacccaatagaatcctgccagaatttctacaaagatttc
acgttacagatcgacatggctttcaatgtgttcttcctactctacttcggcttgcgtttc
atagcagccaatgacaagctatggttctggctagaagttaactcagtagtagatttcttc
acggtccctccagtgtttgtgtcagtatatttaaacagaagttggcttggtttaagattt
ttaagagcccttagactgatacagttttcagaaattttgcagtttctgaatatccttaaa
acaagcaattccatcaagctagtgaatctgtgctctatatttatcagcacgtggctgaca
gcagctgggttcatacatttggtggagaactcaggggatccatgggaaaatttccaaaat
aatcaaccgctaacatattgggaatgtgtttatttacttatggttacaatgtccactgtt
ggctatggagatgtttatgcaaaaacaacccttggtcgccttttcatggtcttcttcatc
cttgggggattggccatgtttgccagctacgtccctgaaatcatagagttaataggaaac
cgcaagaaatatggtggttcctatagtgcggttagtggaagaaagcacatagttgtctgt
ggtcacataacacttgaaagtgtgtccaacttcctgaaggacttcctgcacaaggatagg
gatgatgtcaacgtagaaatcgtctttctgcataatatctcccctaaccttgagctggaa
gctctttttaaacgacacttcactcaggtggaattttatcagggttcagtccttaatccc
catgatctggcgagagtgaagatagagtcagcagatgcgtgcctaatccttgccaataaa
tactgtgctgacccagatgctgaagatgcctccaatattatgagagttatttcaataaag
aattaccacccgaagataagaattatcactcagatgttgcagtatcacaataaggctcat
ctgctaaatatcccaagctggaactggaaagaaggggatgatgcaatctgtcttgctgag
ctcaagctgggtttcatagcccagagctgcctggcaccaggcctttcaaccatgttagcc
aacctcttctctatgaggtcattcataaagattgaggaggatacgtggcagaaatactac
ctggaaggagttgcaaatgaaatgtatacagaatatctgtctagtgcctttgtgggtttg
tctttccctgcagtttgtgaactggtgtttgcgaaactaaagctcttaatgatagccata
gagtacaagtcggaaaaacgagaaagcagaagccgaaagcgtatattaatcaatcctgga
aaccacgtcaagattcaagaaggtactctaggattcttcattgcaagtgatgccaaagaa
gtaaaaagggcatttttttactgcaaggcctgtcatgatgacatcacagatcccaaaagg
ataaaaaaatgtggctgcaaacggcccaagatgtccatctacaagagaatgaaactggca
tgttgttttgattgcggacgctctgagcgtgactgctcttgcatgtcaggcagtgtacat
agtaacatggacacccttgagagagccttcccactttcttctgtctctgttaatgattgc
tccaccagtttacgtgcctttgaagatgagcagccgtcgacactatcaccgaaaaaaaaa
cagcgaaatggaggcatgcgaaattcacccaactcctcacccaaactgatgaggcatgac
cccttgttaattcctggcaacgagcagattgacaatatggatgccaatgtgaaaaaatat
gattctacagggatgttccattggtgtccagccaaggacattgaaaaggtcattttgact
cgaagtgaagcagcgatgacagttttaagtgggcatgtagtcgtttgcatatttggggat
gttaaatctgctttgattggattaagaaatttagtgatgccattacgagccagcaacttt
cactaccatgagctcaagcacattgtgtttgtgggttcacttgaatacctgagaagggaa
tgggagacactgcataacttccccaaggtttcaatcttgcctggtacgccattaagtcgg
gctgatttaagggctgtcaacatcaacctctgcgacatgtgcgttatcctgtcagccaat
cagaataatattgatgatgcttcgctgcaggacaaggaatgcatcttggcgtcactcaac
atcaaatctatgcagtttgatgacagcattggggtcttgcaggctaattcccaaggcttt
acgccccctgggatggatcggtcgtctccagacaacagtccagtccatggcctgttacgt
caaccctccatcacaacaggagccaacatccctatcataacagagctagctaagcctggc
aaacttctgcctttggtttcaatcagtcaggaaaaaaacagtggaacccacattctaatg
ataactgaactggtaaatgattcaaatgttcagttcttggaccaagatgatgatgatgat
ccagacacagaactgtacctcacgcagccctttgcatgtggaaccgcgtttgctgtcagt
gtgctggactcgcttatgagcgcaacatacttcaatgacaatatcctcaccctgatacgg
acattggtaacaggaggagccacaccagagctggaagcactgattgctgaggaaaacgcg
ttgagaggaggttacagcacaccccagacacttgcaaacagggacaggtgtcgagttgct
cagttggctttgtatgatgggccattcgcagacctaggggatggaggttgttatggagat
ctattttgtaaagcactgaaaacatacaatatgctttgctttggaatttatcgattaagg
gatgcacatctaagtactcccagccaatgcactaaacgttatgttatcacaaacccaccc
tatgaatttgagcttgtgccgacagacttgatcttctgtttgatgcaatttgaccacaac
gctggccagtcccgggccagcctttctcattcctcccattcctcctattcttccagcaag
aagagctcatcagttcactccatcccatcaacagcaaaccgacctaaccgcaccaagacc
agggattctcgggaaaaacagaatgcaacaaggatgaatagaatgggccaagcagaaaag
aaatggtttacagatgagccggataatgcctatcccagaaacattcaaatcaagcccatg
agcactcacatggccaatcagatcaatcaatataaatcgacaagcagcttgataccacca
atcagagaagttgaagatgaatgttga
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