Cuculus canorus (common cuckoo): 104068016
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Entry
104068016 CDS
T08597
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104068016 (HDAC9)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104068016 (HDAC9)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
104068016 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
104068016
NCBI-ProteinID:
XP_009569131
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MHSQKNAVDVKSEVPVGLEPITPLDLRTDLRMMVPMVDPIXXXXXXXXXXXXQQQQIQKQ
LLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQELERHRREQ
QLPPLRGKERGRERAVASTEVKQKLQEFLLSKSATKDSPANGKNHSVSRHPKLWYTAAHH
TSLDQSSPPLSGASPPYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPL
LRRKDGNVVSSFKKRLFEVTESSVSSSSPGSGPSSPSNGPTSSITENETPVFPSNIQAEH
LVSQQRLLIQDESVNLLSLYTSPSLPNITLGLPAVQPQISASSSFKEKQKGETQSLRQGV
ALAGQYGGNIPSSSTHPHVALEGKPNSSHQALLQHLLLKEQMRQQKLLVTGAVPLHPQSP
LAAKERVSPGIRAAHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIH
MNKMLSKSIEQLKQPGSHLEEAEEELHGDQSMQEERPSASGASVRAESSSAGVDDRIGQQ
VGAVKVKEEPPDSDEDVQTQQMESGEQAAFMQQEFPAHQRVHQLQIYQAQMATVGMAGLD
KHRPVSRTPSSPTDSTLPHPAVDQPSQLVYTTGVVYDSLMLKHQCMCGNYTNHPEHAGRI
QSIWSRLQETGLLNKCERIRGRKASLEEIQLVHSEHHSLLYGTSPLNRQKLDPRKLLGNV
TQKLFSLLPCGGLGVDSDTVWNELHSAGAARMAVGCVIELAARVASRELKNGFAVVRPPG
HHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPSILYVS
LHRYDEGNFFPGSGAPNEVGSGPGEGYNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANE
FDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQLLKLADGRVVLALEGGHDLTAI
CDASEACINALLGNELEPLPEDIVHQIPNMNAIASLKKTTEIQSKYWKSVEPYSVPVDCA
LAESQKQEREETETVSAMASLSVDVEQCILQEGSRAAVEPMEEEPAL
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgcacagccaaaagaatgctgtggatgtaaagtcagaggttcccgtgggattagagcct
atcacaccattagacttacgaactgatctcaggatgatggttcccatggtggacccaatt
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagcagcagcaaattcagaaacaa
ctgctgattgcagagtttcaaaagcagcatgaaaacctgacccgacagcatcaggcccag
ctccaggaacacataaaggaactcctagctattaagcaacagcaagaactccttgaaaaa
gagcagaaactggagcagcagagacaagagcaggaactggagaggcatcgcagggaacaa
cagcttcctcctctccgaggcaaagaaagaggccgagaaagggcagtggccagtacagaa
gtgaagcagaaacttcaagagttcctgttgagtaaatcggcaacaaaagactctccagca
aatgggaagaatcattccgtgagccgccaccccaagctctggtacacggctgcccaccat
acctcactggatcaaagctctccacccctgagtggggcctcaccaccatacaaatacact
ttaccaggagcgcaagatgccaaggatgattttccacttcgtaaaacagcttcagagccc
aatttgaaagtacgttcacggttaaaacagaaggtggcagaaaggagaagcagtccttta
ctcaggaggaaggatggaaatgttgtcagctcattcaagaagcgactgtttgaggtgaca
gaatcctcggtcagtagcagctcccctggatcaggtcccagttccccaagcaatggtccg
accagcagtataacagaaaatgaaaccccggtttttccatctaacattcaagctgagcat
ctggtttcacagcaacgccttttgatacaggatgaatcggtgaacttgttgagtctgtac
acatccccttctctgcccaacattaccttgggacttccagcagtacaacctcaaatcagt
gcttcatcgtcattcaaagaaaagcagaagggcgagacccagtcgctcagacaaggagtg
gccttggctggacagtatggggggaacattccttcatcctcaactcatcctcacgttgct
ttggagggaaagccaaatagcagccaccaagctctcttgcagcatctgttactgaaagaa
caaatgagacagcaaaaactgcttgtgactggagcggttcctcttcatccacaatctcct
ttagcagcaaaggagagagtctcacctggcataagagctgctcacaaactgcctcgtcac
aggccactgaatcgaacccagtcagctcctcttcctcagagtactttggctcagctggtc
atccagcagcagcatcaacagtttttggagaagcagaaacaataccagcagcagatccac
atgaataagatgctttctaaatccattgagcagctcaagcagcctggaagccacctggag
gaagctgaagaagagcttcacggagatcaatcaatgcaggaagagcgaccttctgcgagc
ggtgccagcgttagggctgagagcagcagtgctggtgtggatgacagaataggacagcag
gtgggggctgtgaaagtcaaagaggagccaccggacagtgatgaggatgttcaaacccag
caaatggaatctggggagcaagctgcttttatgcaacaggagttccctgcgcatcagcgt
gtccaccagttgcaaatctaccaggctcagatggctacagttggcatggcaggattagat
aaacatcggccggtgtccaggaccccatcttcccccactgattccacattacctcaccca
gccgtggaccagcccagccagcttgtctacacgactggtgttgtgtatgacagtctgatg
ctgaagcaccagtgtatgtgtggcaactatactaatcaccctgaacatgctggaaggatc
caaagcatctggtcaaggctgcaagaaactgggttgctaaacaagtgtgagcgaattcga
ggtcgaaaagccagtctggaggaaatacagctggttcactctgaacatcattcactgttg
tatggcaccagccccctgaacagacagaagctggaccccaggaaactcctaggaaatgtg
actcaaaaactcttttcgttgttgccttgtgggggacttggggtggacagtgacaccgtt
tggaacgagctgcactcggccggggcggcacgcatggcggtgggctgtgtcatcgagctg
gcggcccgcgtggcctcccgggagctgaagaatggctttgctgttgtaaggcccccaggc
catcatgctgaagaatcaacagccatgggattctgcttttttaattcgattgcaattact
gccaaatacttgagagacaagctaaatatagggaagatattgattgtagatctggatgtt
caccatggcaacggtacccagcaggctttttatgctgaccccagcatcctgtatgtttcc
ctccatcgctatgatgaaggcaacttctttcccggcagtggagccccaaatgaggttgga
agtggccctggtgaagggtacaacataaatattgcttggacaggtggcttggatcctcct
atgggtgatgttgagtatctcacagcattcaggactgtgattatgccagctgccaacgag
tttgatccagagattgtcctggtgtcagcgggatttgatgccgtggaaggccatgaccct
ccactgggcgggtacaaagtcacagctaaatgttttggtcacctaaccaagcaattgctg
aagctagcggatggccgtgttgtgctggcactggaaggaggacatgaccttactgccatc
tgtgatgcatccgaagcctgtataaacgcccttttaggaaatgagctggagcctctcccg
gaagatattgtgcaccaaatccccaatatgaatgcaatagcttctttaaaaaagaccact
gaaattcaaagcaagtactggaagtcagtggagccatattctgtgccagtggattgtgct
ctggctgagtctcagaaacaagagagggaggagacagaaacggtgtctgctatggcctct
ctttcagtggatgttgagcagtgtatccttcaggaaggcagcagagctgctgtcgagccc
atggaagaagagccagccttgtga
DBGET
integrated database retrieval system
