Cuculus canorus (common cuckoo): 104068020
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Entry
104068020 CDS
T08597
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X2
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104068020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cuca02000
]
104068020
Transporters [BR:
cuca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
104068020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
Rad17
RsgA_GTPase
AAA_5
AAA_28
AAA_7
AAA_30
Zeta_toxin
G-alpha
AAA_18
DUF2207_C
DUF996
COX4
CDC45
Motif
Other DBs
NCBI-GeneID:
104068020
NCBI-ProteinID:
XP_009569142
LinkDB
All DBs
Position
2:complement(128081540..128118645)
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AA seq
1248 aa
AA seq
DB search
MIVGLIAAAANGAGLPLMVIIFGEMTNAFVLSGINSTVSEDTSVNGSSCPPIPGMDIEGE
MTKFAYYYVGIGFAVLILSTIQEWTFLIAATRQTARIRQKFFFAVLHQEMAWFDTIQIGT
LNTRLTEDINTIHQGIGDKICIFVQFLSRFLVGIIIGFVYGWKLTLVILAVSPLLVAAAA
VWSTLLTSLTAKELSAYAKAGAVAEEVLTAIRTVVAFNGQQKALAKYDANLEMARSIGMK
KCIITDTSLGISQFLIFASYALAFWYGTKLIDEEEGYDIGRVLIVFFSVIVGTFSIGQAA
PNLESMAKARGAAYEVYQIIDKKRPIDSSSKDGYKPDKLIGEIEFRNIHFSYPSRPDVKI
LKGLNLKVQTGKTIALVGASGCGKSTTVQLLQRFYDPVEGEIVLDGRDIRTLNVKWLREN
IGIVSQEPVLFATTIAENIRYGREDISDTEIEQAAKEANAFDFISRLPDKFNTVVGERGA
QLSGGQKQRIAIARALARNPKILLLDEATSALDTQSESIVQAALDKARTGRTTIVIAHRL
STIRTADTIAGFDKGVVVEQGTHSELMLQKGVYYSLVMEQGCSDDVQGDETSEESEDTGD
EEYEGNYRNDLVEELTLQHNFEESVTSGRRSIRKRSSRCKSKKFSSKKKPFRKKKKKELE
EENLPAVSYLRILALNKPEWPYVLLGVIAAAVIGAVHPAFAVVFGKIIGAFQETDPEKRS
KNTLVLSLMFLLLGVIILVAYIIQGFMFGKSGETLTKRLRSLSFRALLQQEIGWYDDHKN
AVGVLLTRLATDASQAKGATGSRLGLMTMTVFTLLTAIIIAFVYGWQLTLLILACIPFVI
AANSVNLSSVSGHAAKDQKALEEAGRISTESVENIRTVASLAREEAFYERYVTSLNGPYR
DSLKKAPLYGFTYGIAQCADYFINAAVFRFGAWLIVHCLSNFENVFIVFSSIIFAAMNVG
QSASLAPDYGKAKISAQRIFQLLDRKPLIDSYSEEGEKLSNFEGNIEFRNIHFIYPTRPE
VQVLQGLNLKVNKGQTLALVGSSGCGKSTSIQLLERFYNPVEGQVLADGFDTRSLHLQWL
RSRLGLVSQEPVLFDCSIAENIQYGDNSRLVSQEEIEEAAKAANIHTFIERLPEKYNTRV
GEKGTQLSGGQKQRIAIARALVRNPAVLLLDEATSALDTESEKIVQKALDNARQGRTCIV
IAHRLTTVQTADIIAVIQNGRVVEQGTHSQLLAKEGHYYALVNAQVSN
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgatagttggcttgatcgcagctgctgcaaatggtgctgggctgccacttatggtcatt
atctttggagaaatgacaaacgcctttgtgctaagcggcataaactcaactgtgtcagaa
gatacttcagtaaacggttccagctgtccaccaattccaggcatggatatagaaggtgaa
atgactaagtttgcttactactatgtgggaattgggtttgctgtgttgatcctgagcacc
atccaagaatggacgtttttgattgctgctacgaggcagacagcaaggatccggcagaag
ttcttttttgcagtgctccatcaggagatggcttggtttgacactatccagataggaacg
ctgaacactagactgacagaggacatcaacactatccatcaaggcatcggagacaagatc
tgtatatttgtacaatttttatccagatttctggtggggattatcataggattcgtctac
ggttggaagttgacattggtgattttggcagtcagccctctccttgttgcagcagcagca
gtttggtcaactctcctgacatcccttactgctaaagagctgtctgcttatgcaaaagca
ggagctgtggcagaagaagttttaacagcaatcaggactgttgtggctttcaacggacaa
caaaaggcattagcaaaatatgatgctaacttggagatggctagaagtattggaatgaaa
aaatgcattatcactgacacatctctaggaatttcacaatttcttatctttgcatcctat
gcacttgcattttggtatggaaccaagctcattgatgaggaagaaggttatgacatcggc
cgtgtgttaattgtgttcttctctgtcatcgtcggaaccttctccataggccaggcagct
cccaacctggagagtatggctaaagcacgtggggctgcctatgaagtatatcagattatt
gataagaaacgacccatagatagcagctctaaggatggctacaaaccagacaagctcata
ggagaaattgaattcagaaacatccatttcagttatccatccagacctgatgttaaaatc
ctcaaaggtctaaacttgaaagttcagactgggaagaccattgctttggttggtgccagt
ggctgtgggaaaagcactactgttcagttgctgcagagattctacgatcctgtcgaggga
gaaattgtcctagatggtcgggatattcggactcttaatgtgaagtggctaagagaaaat
attggtatcgtgagccaggagcctgttttgtttgcaacaacaatagctgagaacattcgc
tatggccgagaagatatttctgatactgaaattgagcaagcagctaaggaagccaatgct
tttgactttatatctagactgcctgataaatttaacactgtggtaggggaaagaggggct
cagctgagtggaggacagaagcagcgaatagctattgcccgtgccctagcaagaaatccg
aagattcttcttctagatgaagctacatctgcactagatactcagagtgaatccatagta
caagcagctctcgataaggctcggactggccgtaccaccattgtgattgctcacagacta
tctacaatcaggactgctgacactattgctggatttgataaaggtgtcgtggttgaacaa
ggaacacacagtgaactgatgttgcagaagggagtttattattctcttgtaatggagcag
ggttgtagtgatgatgttcaaggtgatgagacatcagaagaaagtgaagacacaggggat
gaggaatatgagggaaattacagaaatgatcttgtggaggagctgactcttcaacataat
tttgaagaatcggtgacctctgggagacgcagcattcgaaaaagatccagcagatgtaag
agcaagaagttctcttctaagaagaagccctttagaaaaaagaaaaaaaaagagctggag
gaagaaaatctccctgctgtgtcttacttaagaatcctggctctgaacaaacctgaatgg
ccgtatgtgctgttgggggttattgctgctgctgtcataggtgccgtccatcctgcattt
gctgttgtattcggaaaaatcattggggcttttcaagaaacggatccagaaaagaggagt
aaaaacactttggtgctttctttaatgtttcttctacttggagtgattatcttagtagca
tacataatccaaggattcatgtttgggaaatctggggaaacactaacaaagagactgcgt
tctttgtccttcagagcattacttcagcaggagattggatggtatgatgatcataaaaat
gctgttggcgttttgctaactcgtcttgccacagatgcttcccaagccaaaggggcaact
ggaagcagacttggactgatgactatgactgtctttacccttctgactgccatcattatt
gcttttgtatacggctggcagttaactttgcttatcctggcctgcattcctttcgttatt
gctgcaaattctgtgaaccttagctctgtgtctggtcatgccgcaaaagatcaaaaagct
ttggaagaggctggaagaatttcaacagaatcagttgaaaacataagaactgtagcttca
ctggccagggaagaagcattttatgaaagatatgttacaagtttgaatggtccatataga
gattctctgaaaaaagcccccttgtatggatttacctacggaatagctcagtgtgcagac
tactttattaatgcagcagtcttcagatttggggcatggctcattgtccattgtctgagc
aactttgaaaatgtatttatagtcttctcttccatcatatttgcagctatgaatgttggt
cagtctgcttccctggcaccagattatggcaaagctaaaatatcagctcaaagaatcttt
caacttttggacagaaaacctctaattgacagttatagtgaagagggtgaaaaattgagc
aattttgaaggcaacattgaattcagaaatatccattttatatatccaacaaggccagaa
gtacaagttctgcaaggactcaacctgaaggttaacaaaggacagactctggctttagta
ggaagcagcggttgtggcaaaagtacatccattcagctcctggagagattttacaatcct
gtggaaggacaagtgttagcagatggatttgataccagatctttgcatttacaatggctg
aggtccagactgggcctggtgtcacaggagccggttttgtttgactgcagcattgctgaa
aatattcaatatggagacaacagtaggttggttagtcaggaggaaatcgaggaagcagcc
aaagcagcaaatattcataccttcattgaaagactgccagagaaatataatacccgagtg
ggtgagaagggaacacaactttctggaggtcaaaaacaaagaatagcaattgcccgtgct
ctggttcgtaatcctgccgttctgcttctggatgaagctacctctgctcttgatacagaa
agtgaaaagattgtccagaaagctctggataacgcccggcaaggtcgaacctgcatcgtc
attgcccaccgcctgacaacagtacagactgcggacatcattgcagtgatccagaatggc
agggtggttgagcagggcacccacagccagctactggcaaaggaaggacactactatgcg
cttgtaaatgcacaagtctctaattag
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