Cuculus canorus (common cuckoo): 104068029
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Entry
104068029 CDS
T08597
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104068029 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104068029 (XPC)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104068029 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
104068029
NCBI-ProteinID:
XP_053932824
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Position
11:complement(8054464..8067245)
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AA seq
964 aa
AA seq
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MAPPLPGVGPARAALAMARKRPGSPRPVAARKRRSGGPRGHDDFEEQKANIKKNNSKAPA
RKKEEDCDTGVSNSANKAAKRKGAKSPIKENKKPTRSKGNQNKEETCSDSLKTPEKEIKL
ETESPVNKEMDEGNTDNDDDESEDEWEDVEELQEPATDDLKGAAVLPASSNPVEIEIETP
EEMKKRERREKRKAEFEMYLRRIMKRFSKEVRENTHKVHLLCLLANGFYRNRICSQPDLH
AIGLSIIPTHFTKVPANQVDLLYLSNLVKWFVGTFTVNDELSTEKGEPLQSTLERRFAIY
AARDDEELVHIFLIILRALQLLCRLVLSFQPIPLKETKGKSSSKRQSLSGTSEGQESSAT
TPKSLEKKCPCRKAKQDEKSSESKEDSKESKKCKTAQTKRTHKSKFTAGSQEQKESSNEE
SSLAEKDVPVRTKNDRRRRVASKVCYKEESGSDEGSVSDFEISEEDSDLSDEDFETVPKR
RRSSLGSQMSKATAIKSPKPATSESRLSKNTCEAEPRPAKSAAPPLPHAQRKRNKIISSD
EDDGQQEVRKVNGTDQWLEVFLEREDKWVCVDCVHGNIGQPQLCFTYATKPLSYIVGFDN
DGSVRDVTQRYDPVWMTVTRKSRVNPEWWEGTLQPYKSPCVERDKKEENEFQVKLQDQPL
PTAIGEYKNHPLYALKRHLLKYQAIYPESAAILGYCRGEAVYSRDCVHTLHSKDTWLKQA
RVVRIGEVPYKMVKGYSNQARKARLAEPANQDKADLALFGRWQTEEYQPPIAVDGKVPRN
EYGNVYLFLPSMLPIGCVQLRLPNLNRLARKLDIDCVQAITGFDFHGGYSHPVTDGYVVC
EEYKDILLAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKTEPSAS
EAEKGAGFSSDEEGGPSSETAVENMAISWPQNRQLEKKKEEKTTRKTKREKIGEAAQLFP
FEKL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcccctccccttcccggggtggggccggcacgggccgcgctcgccatggcgaggaag
cggccggggtcgccccgtccggtggcagccaggaagcggcgctcgggggggccgaggggg
cacgatgattttgaagagcaaaaggccaatataaagaagaataactcaaaagctccagct
aggaagaaggaagaagattgtgatactggagtttccaactcagcaaataaagctgcaaaa
cgaaaaggggcaaaatcaccaataaaagaaaacaaaaaacctactagaagtaaagggaat
caaaacaaagaagaaacatgcagtgactcactgaagacccctgagaaggagataaagttg
gagacagaatctcctgttaataaagagatggatgaaggcaacactgacaatgatgatgat
gaaagtgaagatgaatgggaggacgtggaagaactccaggaacctgccacagatgactta
aaaggtgctgctgttcttccagcatcaagcaatcctgttgagatagagattgaaacacca
gaggagatgaagaaaagagagaggagagaaaaaaggaaagccgagtttgagatgtacctt
cggagaattatgaaacgtttcagcaaggaggttcgtgaaaacacacataaggttcacctc
ttgtgtttattagcgaatggtttctatagaaacaggatctgcagccagccagatcttcat
gccattggcctgtccatcatccccacccactttacaaaagtgcctgcaaaccaagtggac
cttctctacctttccaacttggtgaaatggtttgtcggaaccttcactgtcaatgatgag
ctttccactgaaaaaggagagccccttcagtcaaccttggagaggcggtttgccatctat
gctgcacgagatgatgaagagttggttcatatatttttaattattctgcgagccttgcag
ctgctgtgccgtcttgtgctgtctttccagcctattcctctcaaggagacaaagggaaaa
agctcatccaagaggcagtctctcagtggtacctctgaagggcaggaaagctctgccaca
acaccaaaatctctggaaaaaaaatgcccctgcagaaaagccaagcaggatgaaaaatcc
tcagaaagcaaagaagacagcaaggagtcaaagaaatgcaaaactgctcagaccaaaagg
acacacaagtcaaagttcactgcaggcagccaggaacagaaggaatccagtaatgaagag
agcagtttagcggaaaaagatgtgccagtcaggaccaagaatgatcgccggagacgagtg
gcctccaaagtgtgttacaaagaagagagtggaagtgatgagggcagtgtttcagacttt
gagatttcagaggaggacagtgatctctctgatgaggattttgaaacagtccctaaaagg
cgcaggagctcactgggctcccagatgtcaaaggcaacagctataaaaagcccaaaacct
gcaacttcagaatcaaggctatccaaaaatacatgtgaagctgagcctaggccagcaaaa
agcgcagctccacctttgcctcatgcacagagaaagagaaacaaaataatttccagtgat
gaggatgatggacagcaggaggtaaggaaggtgaatggcacagaccagtggctggaggtt
ttcctggaacgtgaggacaagtgggtgtgtgtagactgtgttcatggcaacattggacag
ccccagctgtgcttcacatatgccacaaagccgctttcctatattgtgggatttgacaac
gatgggagtgtcagggatgtgacgcaaagatatgacccagtgtggatgaccgtaacaagg
aaaagtcgcgtgaaccccgagtggtgggaaggcaccctgcagccatataaaagtccctgt
gtggaaagagacaagaaggaagaaaatgagtttcaagttaagcttcaagatcagcctcta
ccaacagcaattggagagtacaaaaaccatcctctttatgcactgaagaggcacctcttg
aaataccaggcaatctatcctgagtcagctgctatcctagggtactgcaggggtgaagca
gtctactccagagactgtgtacacacgctgcactctaaggacacttggctaaagcaagct
cgagtggtgaggattggagaagtgccttacaagatggtgaaaggctattccaaccaggcc
aggaaggcccgccttgcagagcctgcaaaccaggacaaagcggacctggcactgtttggt
cgctggcagacagaggagtatcagccacccatagcagtggatggaaaggttccccggaat
gaatatggaaatgtttatctcttcctaccatccatgttacccattggctgtgtgcagctg
agactcccaaacctgaacagactggcgcggaagctggacattgactgcgttcaggccatc
actggatttgattttcacggcggctactcacacccagttaccgatggctatgttgtctgt
gaggagtataaagacatcctccttgctgcctgggagaatgaacaagcagaaatagaaaag
aaggagaaggagaagcgtgagaagagagctctggggaattggaagctgctgacaaaaggc
cttctcatcagagagagactgaagcaacgctactccatcaagactgagccatcagcatct
gaggcagagaaaggagctggattctcttctgatgaagaaggaggtccaagttcagagact
gcagtagagaatatggccatttcttggccccagaaccgccagttagagaaaaagaaagaa
gagaagacaaccagaaagaccaagcgagaaaagataggagaagcggcacagttgttccct
tttgagaaattgtga
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