Cuculus canorus (common cuckoo): 104068187
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Entry
104068187 CDS
T08597
Symbol
RHBDL1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cuca01002
]
104068187 (RHBDL1)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
104068187 (RHBDL1)
Peptidases and inhibitors [BR:
cuca01002
]
Serine peptidases
Family S54: Rhomboid family
104068187 (RHBDL1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580
Motif
Other DBs
NCBI-GeneID:
104068187
NCBI-ProteinID:
XP_053936516
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All DBs
Position
15:1872196..1880086
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AA seq
372 aa
AA seq
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MDRSSLLQLIQEQLDPENTGFIGVETFASLVHSHELPLDPAKLDMLVALAQGNDEGQVCY
QELVDLISSKRSSSFKRAIANGQRALPRDVLLDETGLGFYKRFVRYVAYEILPCEMDRRW
YFYQHRTCPPPVFMAAVTLTQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAW
RFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISFLYLAGVLAGSLTVSITDMRA
PLVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLP
ASGPQPSFMAHLAGAIVGISMGLTILRSYEESLQDQCGWWVLLLSYGTFLLFAVFWNIFA
YDLLGAQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagctccctgctccagctcatccaggagcagctcgaccccgaaaacactggc
ttcattggggtggagacgttcgccagcctcgtgcacagccatgagctgcccctggacccc
gccaagctggacatgctggtggccctggcgcagggcaacgacgaggggcaggtctgctat
caggagctggtagacctgatcagcagcaagcgctcgagcagcttcaagcgcgccatcgcc
aacgggcagcgagcgctgccccgcgacgtgctgctggatgagactggcctgggcttctac
aagcgcttcgtccgctacgtggcctacgagatcctgccctgcgagatggaccggcgctgg
tacttctaccagcatcgcacgtgtccacccccggtcttcatggcagccgtcaccctcacg
cagatcatcgtgttcctctgctacggggcccgcctgaacaagtgggtgctgcagacctac
caccccgagtacatgaagagccccctggtctaccaccccgggcaccgggcacgcgcctgg
cgcttcctcacctacatgttcatgcacgtggggctggagcagctggggttcaacgccctc
ctgcagctgatgatcggggtgcccttggagatggtgcacggcatcctgcgcatcagcttc
ctctacctggccggcgtcctggcaggctccctcactgtctccatcacggacatgagggcc
cccctggtcgggggctcggggggcgtctacgcactctgctcggcccacctcgccaacgtc
gtcatgaactgggctgggatgcgctgcccctacaagctgctgcggatggtgttggcgctg
gtgtgcatgagctccgaagtgggtcgcgctgtctggctgcgcttctcgccgccgctgccg
gcctcgggcccccagcccagcttcatggcacacttggcgggggccattgtgggcatcagc
atggggctgaccatcctgcgcagctacgaggagagcctgcaggaccagtgcggctggtgg
gtcctgctcctctcctatggcacattcctcctcttcgctgtcttctggaacatcttcgcc
tacgacctgctaggggcacagatccctcccccgccgtaa
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