Cuculus canorus (common cuckoo): 104068230
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Entry
104068230 CDS
T08597
Symbol
CASP8AP2
Name
(RefSeq) CASP8-associated protein 2 isoform X1
KO
K25593
CASP8-associated protein 2
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104068230 (CASP8AP2)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
104068230 (CASP8AP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
ADIP
INO80F
DUF2205
Motif
Other DBs
NCBI-GeneID:
104068230
NCBI-ProteinID:
XP_053919089
LinkDB
All DBs
Position
3:22632695..22655481
Genome browser
AA seq
2014 aa
AA seq
DB search
MATDEDGLGLFDIHYGAEASPFKEGDESSVDIYDGLDNGLTVPDSSAPNSTPAGNSLNLF
DEILIEEGTAKEASYNELQAEYGKCQQQIKELMKKFKEIQAQNVILQNENQALKKNISAL
IKTARVEIKRKDEEISNLHQRLSEFPNHRRSFTRTYHPGSANGRCSEMCKTKDSKFRSSD
LGDVIKMEHRVKNDFSKDTYHSCSSHDTDNGKSSSEKRNTPYLPRYSPEELCNSGTPTCL
QNHDHSSNKDNRKERKEIKSNEQYSRGNVNKYKREVHHSTENNGNCNSGDNEEGNSDPQQ
KLKTLSEKASKNESQQKSQTIKLKYSPSVERRVERSVYSWEKQTTSKDRFQIRDELYTDE
KSLNLFKKDIKTHDKDEKSSTQKNKPNEKLQEPSRRSDRGSSPHSRNEHSKSHESRKRHL
EESRKGRDVDCKRDRGTNDHSSREGRASPSNSNSREHKYARLKESGSRHEWETAHSKSER
HRTEEKRKRERENQDENRHFRNERKVAKEISHQSGKESKKGTDVVKSEKNRSYKLEEACK
VADSVKDHKIPKTKDDHTGTKSKDLKLSFMEKLNLTLSPAKKQCLSPTNELKTPSQKATD
DGSPELTLQAELLDSSPLVNCGPTEQTNSTLQVLDSASENNVEPALPVSVTSENEALKVA
AAADPSQSEETLSEAEVGQVEPHTLPRAAEVLVPDEIQTEMLSSTAEACDVVEELKASAT
AVAMTDLNHSESLPPEVAESVEECENLPVAVDVTQDDNVPAVEVAQSETASETMEDLPES
TAEKKEEDKMWLAAGVESSADQCGSQNIVLGDSEAKGSGDLKSCGVTDDISEIKQDSLME
GVKNDDRLVAENVECLIEEKDICKINMNTSQSPDRTVLTDKDEALVDQNACGMEPDLTET
GSTASSLNGEMYPRAKERETNPVPIDDESSILSIDLNHLRYIPKAISPLNSPIRPLAKAL
KMESPCKSLVKSYIKDLIPESAVVVCPSKNLSKEVNKENQKPVSMSDEHLEMESQLSISS
DEIEEGEIISSDEDEEKSKPERCSENTKKSRPKASPETRNLASSPQNQNSKTVCCSEDSG
KFVSVKINTKKNKERHKNQTFRSSKDMKKNKTVSIACLEKIVHVIVEPSNVQEIMQMLRA
IRKQMRKNYMKFKVHFPVQHFHRIIESGIINFTSLIKYLNFSKMSNLGETLKMNICDIIE
SKLKQVKKNSVVDSLFERQVSDMKKQLWKFVDEQLDYLFEKIRRMIIKLCDAGNVGNESE
EGKIERAGKQNHKISNKNDVQRSRKKSVKARPQKPEEYILSKQIVGYQRPRCHQEKIKTD
APKTAFTKCLNSIDNTRNSQTKVHLPKENNSQGTLTPVKGVKYEKEGFQLSRDANKSELG
YELLTEQQASSLTFNLVSDAQMGEIFKSLLQGSDLLEKNGGNIDRHEWEFRTPEKQFLDS
HKCRGNTAGLVQEIAPKEASVESRPVEDTSWPVVSPVRAPSLTSRLQMSVDPDILDESCM
FEVPTNAASCKEDECSLQKNKSYVSSILLEDLAVSLTIPSPLKSDAHLSFLKPENNSSST
PEGVLSAHYSEDALLEEEDATEQDIHLALESDNSSSKSSCSSSWTSRPVAPSFQCRPSLP
MQAVIMEKSNDHFIVKIRRAVPSTSPASDHMASVKEVHPTSTKIEKEEIKSEEKEKYAQS
ATAATVQEAVKLYMVKPVQLHHISTGQVQNPALPQSLKESHNSIGKEETTGLLGPSRKCS
DAESRDTESPDEGSEQSLVHELKASDNINEMGVTSQASFPAGCSMESYIDLTVDIVSENS
CCAVESTADNRTQETSTGNSETSHKKEELEECSDALIDLTEELSGETVADKCDLETKSTS
NADVGGRISIDDKTSKKRKKEVVEEDFSSKRQRTETESAGEGNNASDVKAEEVNSAPRQC
SNKKNELQQNKDSSPSASSASSPSLYAKNIIKKKGEVVVSWTRNDDREILLECQSKGPSS
KTFVSLATRLNKSPIQVSERFKQLMKLFKKSKCK
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagatgaggatggactgggactgtttgatatccactatggtgctgaagcttcc
cccttcaaggaaggtgatgagagctcagtggatatttacgatggcttggacaatggtttg
acagttcctgacagttctgctccaaattctacaccagctggtaacagcttaaatttattt
gatgagatattaattgaagaaggaacggcaaaagaagcatcctacaacgagttacaagct
gaatatgggaaatgtcagcagcaaattaaggagttgatgaagaaatttaaggaaatacag
gcacagaacgtcatcctgcagaatgaaaaccaagctctcaaaaagaatatttcagcactt
atcaaaacagcaagagttgaaattaagcgtaaagatgaagaaatcagtaatctccatcaa
aggctatcggaatttcccaatcatcggagaagcttcaccagaacataccatccaggatca
gctaatggaaggtgctctgagatgtgtaagacaaaagattccaaattcagatcttctgat
ttaggtgacgttataaagatggagcatagagtgaaaaatgacttctcaaaagatacatac
cacagttgctcatctcatgatacagataatgggaagtctagctccgaaaaaagaaacact
ccatatttaccgagatactcccctgaagagctctgcaacagtggtactcctacttgtcta
cagaaccatgaccatagctccaacaaggataatagaaaggaaagaaaagaaattaaaagt
aatgaacagtatagtaggggaaatgtcaacaaatacaaaagagaagtacatcacagcact
gaaaacaatggtaactgtaacagtggtgacaatgaagaggggaattcagatcctcagcaa
aagctgaaaaccctttcagagaaggctagtaaaaatgagtcacaacaaaaaagtcagacc
ataaagctcaaatacagtccaagtgtggaaagaagagtagaaaggagtgtttattcctgg
gagaaacaaactaccagtaaagacagatttcagataagagatgaactgtatactgatgag
aaatcactaaatttattcaaaaaagacattaaaacacatgataaagatgaaaaaagtagt
actcaaaagaataaaccaaatgaaaagctacaagagccatcaaggaggtctgatagaggg
agtagtccacactcaaggaatgaacattcaaaaagtcatgagtcacgtaaacgtcacctg
gaagagtctagaaaaggaagagacgttgactgcaagagagacaggggaacaaatgatcat
tcttctcgagaaggaagggcttcaccttctaattccaacagcagagagcataaatatgca
cgcttgaaggaaagtggtagtaggcatgaatgggaaacagcacattccaaatcagaaaga
cacagaactgaagaaaaaaggaaaagagaaagagagaatcaggatgaaaacagacatttt
agaaatgaaagaaaagttgcaaaagagatttctcaccaatctggaaaagaatccaagaaa
ggtacagatgttgtaaagagtgagaaaaacagatcttataagctagaagaagcatgcaaa
gtagcagatagcgtaaaagaccataaaatccccaaaactaaagatgatcacactgggaca
aaaagcaaagacttaaaacttagctttatggaaaagctaaatttaactctttctcctgct
aagaaacaatgtctctctccaacaaatgaacttaaaacaccttcccaaaaggccactgat
gatggaagcccggagctcacgttgcaggcagaactgttagattcttccccccttgttaac
tgtggtcccacagagcaaacaaattcaacactacaagttctggacagtgcatctgaaaac
aatgtggaaccagcactgcctgtttctgtcacttctgaaaatgaagccttgaaagtagca
gcagcagcagatccatcacagtctgaagaaaccttatcagaagcagaagtgggtcaggta
gagccccataccttgccaagagctgcagaggtactggttcccgatgagatacagactgag
atgttgtcatcaacagcagaagcttgtgatgtggttgaagaattgaaagcctcggcaaca
gcagtagctatgactgatctgaatcactctgaatctttgcccccggaggtggcagagagt
gtggaagagtgtgaaaacttgcctgtggcggtagatgtgacacaagatgataatgtacca
gcagtagaagtggcacaatctgaaactgctagtgaaactatggaagaccttccagagtca
acagcagagaagaaagaggaagataaaatgtggctagctgctggtgtggaaagctcagca
gaccaatgtggctctcaaaacattgtcttaggtgactcggaagccaaaggttctggtgac
ctgaagtcctgtggtgtcacagatgatattagtgaaataaaacaagactctttaatggaa
ggagtgaagaatgatgatcgcttggttgcagaaaatgttgagtgtctcattgaggaaaag
gatatctgcaaaattaatatgaatacatctcagtcacctgatagaactgtgttaactgat
aaggatgaagcattagttgaccagaatgcttgtggtatggagccagacctaactgaaact
ggttcaacagcatcttctcttaatggtgagatgtatcctagagctaaagagagggaaact
aacccagttcctattgatgatgaaagctcaatactgagcattgatctcaatcacctgcgc
tatattccgaaggcaatcagcccgctgaacagtccaatacgacctttggctaaagcactc
aagatggaaagtccctgcaaaagtcttgtgaagagttatattaaagatttgattcctgaa
agtgcagttgtcgtctgtccctcaaagaatttgtcaaaggaggtaaacaaagaaaatcaa
aagccagttagcatgtctgatgaacacttagagatggagtctcagctgagcatctcttca
gatgaaatagaagaaggagaaatcataagtagtgatgaagatgaagaaaaatctaaacca
gaaaggtgctctgaaaatacgaaaaagtcaagaccaaaagcttctcccgagacacgaaat
ttggccagcagtccacagaatcaaaacagcaaaactgtgtgttgcagtgaggatagtgga
aaatttgtttctgtgaaaataaatacgaagaagaacaaagagagacataaaaatcagact
ttcagatcttcaaaggacatgaagaaaaataaaactgtgagcattgcttgtcttgaaaaa
atagttcatgttattgttgaaccttcaaatgtacaagaaatcatgcagatgctaagagct
atacgaaagcagatgaggaaaaactatatgaagttcaaggtacactttccagttcagcat
tttcacagaattatagaatctggtatcataaattttacatcattaataaaatacttgaac
ttttccaagatgtctaatttaggtgagacattaaaaatgaatatctgtgatatcatagag
tccaaacttaagcaagttaaaaagaattcagtagtggacagtctttttgaacgacaagta
tcagatatgaaaaaacagctatggaaatttgtagatgaacagcttgattacttatttgaa
aagataaggagaatgataataaaactatgtgatgcaggaaatgtgggaaatgagagtgag
gaagggaaaattgaaagagcaggaaagcaaaaccacaaaatcagtaataaaaatgatgta
caaagatctagaaaaaaatccgtgaaagccagacctcaaaagcctgaagaatatatcctt
tcaaagcaaattgtgggttaccaacgacccaggtgtcaccaagagaaaattaaaacagat
gcaccaaaaactgcctttacaaaatgtcttaattccattgataacacaaggaattcccaa
accaaagtgcacctccctaaagagaataattcacaaggtaccctcactccagtgaagggt
gtaaaatatgaaaaggaaggattccagctatccagagatgctaacaagtctgaacttggt
tatgaacttctcacagaacagcaagcatccagtcttacatttaatcttgtaagtgatgct
caaatgggtgaaattttcaaaagcttattgcaaggttctgatctcttggaaaaaaatggt
ggcaatattgacagacatgagtgggaattcaggacaccggaaaaacagttcttagacagt
cataaatgcagaggtaatactgctggactcgtgcaagagattgctccaaaggaggcttct
gtggaatctcgaccagtagaagataccagctggcctgttgtttcgcctgtaagagctccc
tctttaacatctaggcttcagatgtctgttgatccagacatactagatgaaagctgtatg
tttgaggttcctacaaacgcagcttcgtgcaaggaagatgagtgcagtttgcaaaagaat
aaatcatatgtttcttctattctccttgaagatttggctgtttccttaactattccatca
cctttgaaatcagatgctcacctcagcttcctaaaacctgagaataattctagctctact
cctgagggtgttctcagtgcacattacagcgaagatgcactccttgaagaggaggatgcc
actgaacaagacattcatttggctttagaatctgataactcaagcagtaaatcaagttgt
tcttcatcatggacaagtcggcctgttgctcccagttttcagtgtcgccccagcctaccg
atgcaagcagtaatcatggagaaatctaatgatcatttcattgtaaaaattaggcgtgca
gtgccatctacctcaccagcatctgatcacatggcttcagtgaaggaggtacacccaacc
tcaaccaagattgaaaaagaagaaataaaaagtgaagaaaaagaaaagtatgctcagagt
gccacagcagccactgtacaagaagctgtcaaactgtatatggttaagccagttcagttg
catcacattagcactggacaagtacaaaatcctgccttacctcagtctctaaaggagtca
cataatagtattggaaaggaagaaactactgggttgcttgggccctctagaaaatgttca
gatgcagaaagccgtgatactgaaagcccagatgaaggctctgagcaatctctggtgcac
gaattgaaagcatctgacaacataaatgaaatgggtgttacatctcaagcttcttttcct
gctggatgcagtatggagtcatacatagacttaacagttgatattgttagtgaaaattca
tgttgtgcagtggaatccactgcagataacaggactcaggaaacttctacaggaaactct
gaaaccagtcataaaaaagaggaactggaagagtgctctgatgcattgatagacttaaca
gaagagctttccggtgagacagtagcagataaatgcgatcttgaaacaaaatccacttca
aatgctgatgtaggtggccggataagtatagatgataaaactagtaaaaaaaggaaaaag
gaggttgtcgaagaggatttcagctccaaaagacaacgaacagaaactgaatcagcaggt
gaagggaacaatgcaagtgatgtgaaggctgaagaggtaaattcagcacctagacaatgt
tccaataagaagaatgagttgcagcagaacaaagactcttctccttcagcttcatctgca
tcatcacctagtctgtatgccaaaaacattattaaaaagaagggagaagtagtagtttcc
tggacgagaaatgatgaccgagaaattttactggaatgtcagagcaaaggaccatcaagc
aaaacctttgtttccttggctactaggctgaacaaaagcccaattcaggtttcagaaaga
ttcaaacaattaatgaagctgttcaagaaatccaagtgcaagtaa
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