Cuculus canorus (common cuckoo): 104068270
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Entry
104068270 CDS
T08597
Symbol
UBTF
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104068270 (UBTF)
03021 Transcription machinery [BR:
cuca03021
]
104068270 (UBTF)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
104068270 (UBTF)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
104068270 (UBTF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
104068270
NCBI-ProteinID:
XP_053944539
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All DBs
Position
25:210916..228555
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AA seq
800 aa
AA seq
DB search
MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAF
KDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNTKKSDIPEKPKTPQQLWYNHEKKIYLKVRPDATTKEVKESLGKQWSQLSDK
KRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKP
PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLR
FLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEE
KRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGK
LPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKR
YERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI
GSRWQRISQGQKDHYKKLAEEQQKQYKVHLEIWLKSLSPQERAAYKEHTSNKRKSIGKIR
GPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESED
GDECECRVSHQSQSFTPVQLKSEYAGWCWGQKPCPCLVLATGQNDEDDEDEDDEDEDDND
SEGSSSSSSSSGDSSDSDSN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgaagccgagtgccctgcagacttggaaatgacagctcccaaaaaccaagac
cgctggtcacaggaggacatgctgactctgctggagtgcatgaagaataacctgccctcc
aatgacgggagcaagttcaaaaccaccgagtcccacctggattgggagaaagtagctttc
aaggacttctcgggggagatgtgcaagatgaagtggatggagatttctaatgaggtgagg
aagtttcgcaccctcacagagcttattatggatgctgaagagcacgtgaagaatccttat
aagggcaagaagctcaagaaacaccctgacttccccaagaagcccctgactccctatttc
cgcttcttcatggagaagcgggccaaatacgccaagcttcaccctgaaatgagcaacctg
gatctcaccaagatcctgtccaagaaatacaaggagcttcctgagaagaaaaagatgaaa
tacatccaggacttccagcgagagaagcaggagtttgagaggaacctggcaaggttcagg
gaagatcacccggatctcatccagaacaccaagaaatctgacatccctgaaaaacccaag
accccccagcagctgtggtacaaccatgagaagaagatctacttgaaagtgcgtccagat
gccaccacgaaggaggtgaaagagtcgctgggcaagcagtggtctcaactctcggataaa
aagaggctgaaatggattcataaggccctggaacagcggaaggagtacgaggagatcatg
cgtgactacatccagaagcaccctgagctgaacatcagcgaggagggcatcacccgctcc
accctcaccaaggctgagcgccaactcaaggacaaatttgatggacgacccacaaagcca
cctccgaacagctactccctgtactgtgcagagctgatggccaacatgaaagacgtgccc
agcaccgagcggatggtgctgtgcagccagcagtggaaactgctctcccaaaaggaaaag
gacgcctaccacaaaaagtgtgatcagaaaaagaaagactatgagattgagctgctccgc
ttcctagagagcctgcctgaggaggagcagcagcgggtgctaggcgaggagaagatgctg
ggcagcaaccggaaaggagcgacaagtcctgcatccaaaaagtcctcaccagagactggc
aaggccagctcagagaagcccaaacggcccatctctgcaatgttcatcttttcggaggag
aagcggaagcagctgcaggaggagcggccagagctgtcagagagtgagctcacccggctc
ctggcccgcatgtggaatgacctctccgagaagaagaaggccaagtacaaagcgcgagag
gcggcgatgaaggcgcagtcagagaagaagcacagctcagataaagaggagcgtgggaag
ctgcctgaatctcccaagacagccgaggagatctggcaacagagcgtcattggagactac
ctggctcgtttcaagaatgaccgggggaaggctctgaaggccatggaagccacttggaac
aacatggagaagaaagagaagctgatgtggatcaagaaagcagcagaggatcaaaagcga
tacgagagggagctgagcgagatgcgggcccctccgtgctctaccaactcagccaagaaa
atgaagttccaaggagagccgaagaagcccccgatgaacggttaccagaaattctctcag
gagctgctgtcgaacggagagctgaaccacctcccgctgaaggagcggatggtggagatc
ggcagccgctggcagcgcatctcccagggccagaaggaccactacaaaaaactggcagag
gagcagcagaagcagtacaaggtgcacctcgaaatctggctcaagagcctctcgccccag
gagcgtgctgcctacaaggaacacacttccaacaaacgcaagagcatagggaagatccgg
ggccccaaccccaagatgaagcctacgatgcagtccaagtcggagtcagaagatgatgac
gaggaggaagaggaggaggaagatgacgatgaagatgaggatgatgatgatgacaatggc
gactcctcagaggaaggcggtgactcctcagagtccagcagcgaggaggagagtgaggac
ggggatgagtgtgaatgccgagtaagtcaccagagtcaaagctttacaccggtgcaactg
aaatcagagtatgctggatggtgctgggggcagaaaccgtgtccgtgccttgtgctcgcc
accggacagaacgatgaggatgatgaagatgaggatgatgaggatgaggacgacaacgac
tcggagggcagcagcagctcttcctcctcctcgggggactcctccgactccgactccaac
tga
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