Cuculus canorus (common cuckoo): 104068346
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Entry
104068346 CDS
T08597
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04217
Necroptosis
cuca04622
RIG-I-like receptor signaling pathway
cuca04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
104068346 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104068346 (CYLD)
04625 C-type lectin receptor signaling pathway
104068346 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cuca01002
]
104068346 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104068346 (CYLD)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104068346 (CYLD)
Peptidases and inhibitors [BR:
cuca01002
]
Cysteine peptidases
Family C67
104068346 (CYLD)
Ubiquitin system [BR:
cuca04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104068346 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
104068346
NCBI-ProteinID:
XP_053934707
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All DBs
Position
13:12334222..12362060
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AA seq
954 aa
AA seq
DB search
MNSGLWSQEKPSSSYWEERVFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVGHSR
NIPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
TKGIQIDIGSPVRVQLRSGDDKYPGVVRFRGPLLQERSLTGVYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVEAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPETVSQDRRPPKLAYTSRGGGDKSVFNHSKPKATGSTSEPGNRNRSEVFYTLNGSS
VDSQPQTKTKPPWYIDEVAEDPAKSLTDSSPGFGHSSPPLQPPLTNSVSTENRFHSLPFS
LTKTSTTNGTIGHSPLSLSVQSVIGDVNTTPSQESPSTAGPVGNSHGLEAGSLAEVKENP
PFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPD
SRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCY
LDSTLFCLFSFSSVLDTVLLRPKEKNDVEYYSETQDLLRTEIVNPLRIYGYVCATKIMKL
RKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKN
EKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLE
DTPRQCRICGGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPK
DLPDWDWRHGCIPHQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFN
IPQVSPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgggcttatggagtcaagaaaaaccaagttcatcctattgggaagagcgggtc
ttttatttacttctccaggagtgcagtgtcatagacaagcagactcaaaagctcttgaaa
gtgcccaaaggtagcattgggcagttttttcaagaccgttcttctgtgggacactccaga
aatattccttgtaaaggcaagaaacttcagattggattaaagattctggaacaacctcat
gcaatcctctttgtggatgagaaggatgttatagaaataaatgaaaaattagccgagttg
cttttggccattactaactgtgaggaaagatacagtctgtttaaaagcaagagcaggtta
actaaaggcatccagatagatattggctcacctgttagagtccagctgagatcgggagat
gataaatatcctggagttgttcgcttcagaggacccttattgcaagaaaggtccctaacg
ggggtatactttggagtagagttgctggaagaaggtcgtggtcagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgtgatgaagactgtggagtttttgttgctttg
gacaaactggagctagtagaagatgatgacaatgaactggaaagtgactatgcagctcct
gttgaagcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggcaacgaa
agtttaggatacgttgttggagtggacatggataatcctattggaaactgggatggaaga
tataatggaatacagctgtgcagttttgcaagtgttgaaagtacacttcttttgcatatc
aatgatgttattccagagaccgtgtcacaggacaggagacctcccaagcttgcctatacc
tcaagaggtggtggtgacaaaagtgtgttcaatcatagtaagccaaaggctacaggatct
acctctgaacctggaaatagaaacagatctgaagtcttctacacattaaatggctcgtca
gttgactctcagcctcaaacaaaaacgaaacccccatggtatattgatgaagtcgctgaa
gaccctgcaaaatcacttaccgattcatctcctggatttgggcattcatcaccaccactg
cagccacctttaacaaactctgtgtctacagaaaacagatttcactctctcccttttagc
ttgacaaaaacgtcaactactaatggtactattggacacagtcctctctctttatctgtt
cagtcagtcattggtgatgtaaatactacacctagccaggagagtccatcaacagcaggc
ccagttgggaactcacatggtcttgaagcgggttccttggctgaagttaaagaaaaccct
cctttctatggagtaatccgctggattggccagccccctggagtaaatgaagtattggct
ggactggaattggaagatgaatgtgcaggttgtacagatggaacatttaaaggaactcga
tacttcacttgtgctccgaagaaagctctttttgttaaacttaaaagctgcaggccagat
tccaggtttgcctcactacagcccgtttccaaccagattgaacgctgcaactctctagcc
tttggaggttacttaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaa
ggtttagagacaatgattggaaagaagaaaggtatccagggtcattacaactcctgttac
ttagactccaccttgttctgcctgttttcttttagctctgttttggacactgtgctgctc
aggcctaaagaaaagaatgatgtagagtattacagcgagactcaagacctgctgcggaca
gagattgtgaatcctctgagaatatatgggtatgtatgtgctacaaaaataatgaaactg
aggaagatacttgaaaaagttgaggccgcatcaggattcacttcagaggaaaaagatcca
gaagaatttctgaatattttatttcaccatattttaagagttgagccactattgaaaata
agatcagcaggtcagaaagtacaagactgttacttctatcagatttttatggacaaaaat
gagaaagttggagtcccaacaattcagcagttactagagtggtcattcatcaacagtaac
ttgaagtttgcagaggcaccctcttgcctgattatccagatgcctcggtttggaaaagac
ttcaaaatgttcaacaaaatttttccatccttggaattaaatataacagacttacttgaa
gatactcccaggcagtgccgaatatgtggagggcttgctatgtatgagtgcagagaatgt
tatgaagatactgatatttctgctgggaaaatcaagcagttctgcaaaacctgcaatacg
caagttcatcttcatcccaagagacagagtcataaattcaatccattgtcactacctaaa
gatctgccagactgggattggcgacatggctgcatcccgcaccagaagatggagttgttt
gctgttctctgcatagaaacaagccactatgtagcttttgttaaatacggcagggatgac
tctgcctggcttttctttgacagcatggcagatcgggacggcggtcagaatggctttaac
attccacaagttagcccatgtccagaagttggtgaatacctgaaaatgtctctagaagaa
ttacactcactggattccagaaaaattcaaggttgtgcacgaagactactttgtgatgct
tacatgtgcatgtatcaaagtccaacgatgagtttatacaaatga
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