Cuculus canorus (common cuckoo): 104068414
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Entry
104068414 CDS
T08597
Symbol
GTF2H3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03022
Basal transcription factors
cuca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104068414 (GTF2H3)
09124 Replication and repair
03420 Nucleotide excision repair
104068414 (GTF2H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104068414 (GTF2H3)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104068414 (GTF2H3)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104068414 (GTF2H3)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104068414 (GTF2H3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
TetR_C_38
Motif
Other DBs
NCBI-GeneID:
104068414
NCBI-ProteinID:
XP_053938506
LinkDB
All DBs
Position
17:complement(5859740..5865348)
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AA seq
307 aa
AA seq
DB search
MSSEDELSLLVIIIDTNPIWWGKRVLGEAEFTLSKCIDAVMVLGNSHLFMSRNNRLAVIA
SHTQESRFLYPGKHWASADLFGDGSSSVESNCSGSKDGKYELLTAINDAIAEEIKDLMTK
TDMKGQQTETLLAGSLAKALCFINKMSKELKANQEMKSRILVIKAAEDSALQYMNFMNVI
FAAQKQSILIDACVLDSDSGLLQQACDITGGLYLKVPHMPSLLQYLLWVFLPDQEQRSQL
VLPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICSTCETAFKISLPPVMKAKK
KKLKLAA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggaggacgagctgagcctgctggtcatcatcattgacaccaacccgatctgg
tggggaaagagggtgctgggagaagccgagttcaccctatcaaaatgcatcgatgcagtg
atggtactgggaaattcgcacttatttatgagtcgcaacaacagacttgctgtaatagca
agtcacacgcaagaaagccgtttcttgtaccccgggaagcattgggcttctgcagatctc
tttggagatggcagtagttctgtggaatctaattgctctggcagcaaggatggaaaatac
gagttgttaacagcaataaatgatgcgattgcagaagagattaaagacctcatgacaaaa
actgacatgaagggtcagcaaacagaaactttgttagcaggatcacttgctaaagcactt
tgttttatcaacaagatgagcaaagagttaaaagccaatcaagaaatgaaatcaaggatt
ttggtcataaaagctgcagaagacagtgcattgcaatatatgaatttcatgaatgtgatc
tttgcagcacagaaacagagtattttgattgatgcctgtgtcttagactctgattcaggt
cttctacagcaggcttgtgacattacgggtggcttatatttgaaagtgccccacatgcca
tcccttctgcagtatctgttgtgggtatttctccctgatcaagagcaaagatcccagctt
gtccttccacctcctgttcatgttgactacagagctgcatgcttctgccatcgaaatctc
attgaaattggttatgtgtgctctgtgtgcctgtcaatattctgcaacttcagtcctatc
tgtagtacatgcgagactgctttcaaaatatcgttgccacctgtcatgaaggctaaaaag
aagaaattaaagttagctgcctaa
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