Cuculus canorus (common cuckoo): 104068415
Help
Entry
104068415 CDS
T08597
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104068415 (DDX55)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104068415 (DDX55)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
Pre-60S particles
Helicases
104068415 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
CTT_SPB4
AAA_22
SBF_like
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104068415
NCBI-ProteinID:
XP_053938504
LinkDB
All DBs
Position
17:complement(5866500..5879204)
Genome browser
AA seq
591 aa
AA seq
DB search
MAGAHERWEALPVALSPAVRRALQELGFASMTPVQSATIPLFMNHKDVAAEAVTGSGKTL
AFVIPTLEILLRREEKLRKMQVGAIIITPTRELAIQIDEVLSHFTKHLPRFTQILLIGGR
NPIEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGF
EASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASNTQKTPTR
LENYYMVCKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIHG
KMKHKRNRIFTEFRKLPGGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTAR
IGNAGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTNVLDLLPKLQSMALADRAVFEKG
MKAFVSYIQAYGKHECNLIFRIKDLDFASLAKGFALLKMPKMPELRGKCFPDFTPVIVNT
DSISFKDKNREKQRKKQLEQQRKEREENGGKKKFIKNKAWSKQKAKKEKKKKIMAKRKRE
EGSDIEDEDMEELLNDTRLLKKLKKGKISEEEFEKRLTGSQGRLKAETVAD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcccatgagcgctgggaggcgctgcccgtggcgctgagccccgccgtgcga
cgggcgctgcaggagctcggcttcgccagcatgaccccggtgcagtctgcaaccatcccg
ctcttcatgaatcacaaggatgtggctgcagaagcggtaaccggcagtggcaaaaccttg
gcatttgtaattcccacactggaaattcttctcagacgggaagagaaattaaggaaaatg
caggttggagccataattatcacaccaacgagagagttagcgattcagattgatgaggtc
ctgtctcatttcacaaaacacttgcccaggtttactcagattcttttaattggtggtagg
aatcccatagaagatgttgaaaagtttaaagaacacggtgggaacatcattgtggctacg
ccgggccgcttggaggatctgttcagaagaaaagcagatgggctggatctagcaagttgt
gtgaagtctcttgacgtgttggtgttagatgaagcagacagactcctcgacatgggcttt
gaagcaagtttgaacaccattctggactttttgcccaagcagaggcgcacaggtctgttc
tcagcaactcaaactcaagaggtggagaacctggtgagagccggtctccgtaatcctgtc
cgcatctcggtgaaagagaagggagtggcagcaagcaacacacagaaaactccaacacgc
ctggagaactattacatggtgtgcaaagcagatgaaaaatttaatcagttggtgcatttt
cttcgacagcacaaacaggagaaacatttagtctttttcagcacgtgtgcctgtgtggaa
tactatggaaaggctttggaatccttaattaagcaagtgaaaataatgagcattcatggg
aaaatgaaacacaagcgtaacaggatttttactgagtttcggaagctcccaggtggcatt
ttagtttgcactgacgtgatggcccgtggcatagacatcccagaagtgaactgggtttta
cagtatgatcctcccagcagtgcaagtgcctttgtgcatcggtgtggtcgaacagcacgg
atcggcaacgcaggcagtgcacttgtatttttgcttcccatggaagaatcttacgttaac
tttctctcaatcaaccaaaagtgtcctatgcaggaaatgaaaccacagacaaacgtgttg
gatcttctcccaaagctgcagtccatggccctggctgaccgggcagtgtttgagaaaggg
atgaaggcctttgtgtcttacatccaggcttacggcaaacacgaatgtaacctgatcttc
cgaataaaagatctggattttgctagcctcgccaaaggttttgcattgttaaaaatgcca
aagatgcctgaactaagaggaaaatgttttccagactttactcctgtcattgttaataca
gactccatttcatttaaggataaaaatagagaaaaacagagaaaaaagcaattggaacaa
caaagaaaagaaagagaggagaacggaggcaaaaagaaattcataaagaacaaagcctgg
tcgaagcagaaagccaagaaggagaagaaaaagaaaataatggctaaaaggaagcgtgag
gagggctccgatattgaagatgaagatatggaagagctgctgaatgacacgagactcttg
aagaaattaaaaaagggaaaaattagtgaagaagagtttgagaagagactaacgggcagc
cagggtagactgaaggcagaaactgttgctgactga
DBGET
integrated database retrieval system
