Cuculus canorus (common cuckoo): 104068435
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Entry
104068435 CDS
T08597
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104068435 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104068435 (DEPDC5)
Membrane trafficking [BR:
cuca04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
104068435 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
104068435
NCBI-ProteinID:
XP_053937954
LinkDB
All DBs
Position
17:6555255..6599141
Genome browser
AA seq
1602 aa
AA seq
DB search
MRTYKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPEMHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRLGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKPLTEKAKSNRDASLGAPKDSENALPIQVDYDGYDAQVFRLPGPSRAQRCTT
FSRSVRERESRTRKSSSSCDVSCSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPRPH
LHQYEVSSSLGYTSTRDVLENMLESQQRDSSAPGRFHVGSAESMLHIRPGGYAPQRALIN
PFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGQQDLTHSSAELL
ELAYHEATGRHITSRHPGDSASFLSFSGAEEYSSGLSGSSNAGINLKTQNKDSLEDAVSN
SLDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLP
EADMDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKPQKPATAVPPPLSSSPLYSRG
LVSRNRPEEEDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDS
EFVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRI
MEGEVHCDVYGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKGLQIAG
PIPTHSLEQSGPPIGKKGTSALSALLEMEASQKTLGEQQAAVLSGKSSGQPSESGSIAIT
PSYMDSPRKDGAFFMDFVRSPRTASAFYSQVSIDQSVPAASDGSTSMNTGQLPDRGNTPA
PGSSQSVGEQGCATANAAEGSSQQCSASSLTSSSTLIEILEAMKHPTTGIQLLSEQKGLS
PCCFISAEVVHWLVNNVEGVQTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIV
VDKEPDRVGMQQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSDIPAFFLPWLPSRPAS
YASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNA
AFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIP
LNVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIAYRFGFVQDKYSASAFNFPAENKPQY
IHVTGTVFLQLPYSKRKFSCGQQRRRRNSTSSSNQNMFCEERIGYNWAYNTMLTKTWRSS
ATGDEKFADRLLKDFTDFCWNKDSRLVTFWTDCLDKMHASAP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttacaaggtgtacaagctcgtcatacataagaagggctttggaggcagtgat
gatgagctggtggtgaatcctaaagtatttcttcaaatcaagctgggagatgttgtagaa
atcgcccatcccaatgatgagtacagtcccctgcttctgcaagtgaagtcactcaaggag
gatttgcagaaagaaacgataagtgtggatcagacagtggcacaagtgttccgactgcgg
ccgtaccaggatgtccatgtcaatgttgttgacccaaaggaggtgacactggacttggtg
gagctgacctttaaggaccagtatattggccgtggggatatgtggcggctgaagaagagt
ttggtcagcacatgtgcgtatgtcacccaaaaagttgaatttgcgggtatcagggcccag
gcaggtgaactgtgggttaagagtgagaaagtcacttgtggatacatcagtgaggacacc
cgggtggtcttccgctccacttctgctatggtttatatttttatccagatgagctgtgaa
atgtgggatttcgatatttatggggacctgtacttcgagaaagctgtgaacggtttcctt
gctgacctcttcacgaaatggaaggagaagaactgcagccatgaagtgacagtggttctg
ttttctagaacattttatgaagcaaaatctatagatgagtttcccgaaatgcatcgtgcg
tcaattcggcaggatcacgagggaagattttatgaagatttttacaaagttgtggttcaa
aatgagaggcgagaagagtggacttcattgcttgtgaccattaaaaagctcttcatccag
tatcctgttttggtgcgactcgagcaagcagagggctttcctcccggctacaattccact
tcggcacaagggaactacctggaggccataaatctttcattcaatgtgtttgacaagcat
tacataaaccgcaacttcgatcggactggccagatgtcggtggttatcacgcctggtgtg
ggtgtctttgaagttgatagactccttatgattctgaccaaacagcggatgatagacaat
ggaataggtgtggacttggtatgcatgggagaacagccgttgcatgcagtaccgctcttt
aagcttcataatcgctgtggacctggtgactccagattgggtgatgactacaatattcca
cactggataaaccatagtttctacacatccaaaagccagctcctgtgtaacagctttact
ccacggatcaagctggcaggaaggaaacctctgaccgagaaagcaaaaagtaaccgagat
gcctcattaggggctccaaaagattctgagaatgccctgcctatccaggttgattatgat
ggctatgatgcccaggtgttcaggctgccaggcccatccagagcccagcgctgtaccact
ttcagcagatctgtgagggagcgggaaagtcgtaccaggaagagctccagttcctgtgat
gtttcgtgcagcccttctctgcagagccgcacactgccccccgaggaggtgaggagccag
gcttccgacgacagctccctgggcaagatctccaacatcctgatgatcccacggcctcat
ctgcatcagtatgaagtcagcagctctttgggctataccagcaccagagatgtccttgag
aacatgctggagtctcagcaacgcgactccagtgcccctgggaggttccatgtgggcagt
gcagaatccatgctgcacatccggccagggggatacgccccgcagcgagcactcatcaac
ccctttgccccatcccgcatgcccatgaagctcacgtctaacaggagacgctggatgcac
acttttcctgtgggtccatcaggagaagctatccagatccatcaccaaacccgtcagaat
atggcagaaatgcagggcaatgggcagcaggacttgacgcattcctctgcggagctgctg
gagctggcttaccacgaggccactggcaggcacatcacctctcggcatccaggagacagt
gcctctttcctgagcttcagcggggcggaggagtactccagtggtctgtctggcagcagc
aatgcagggataaatctcaaaactcagaacaaggattccttggaagatgcagtctccaac
tctttggatccaattctgacactgtctgctccccccgtagtgccaggcttctgttgtaca
gttggagtggactggaaatccctcactactccggcatgtctcccgcttaccacggactac
ttccctgaccgccagagcctgcagaacgattacacggagggttgctatgatctcctccca
gaagctgacatggacaggagagatgaggaaggagtgcagatgacagcccagcaggtgttt
gaggagttcatttgtcagcggctcatgcaaggctatcaaattattgtgcaacccaagcca
cagaaacctgccactgccgtgccacccccgctcagcagcagccccctgtacagtcgaggt
ctggtatccagaaatcggcctgaggaagaagatcagtactggctgagtatgggccgtact
ttccacaaagtaacattaaaagacaaaataattaccgtgactcgatacctgccaaaatac
ccatacgagtctgctcagataaactacacttacagcttgtgcccctcacactcggactct
gaatttgtctcttgctgggtagaattttcccacgagagactggaagagtataagtggaat
tacttggatcagtatatctgctctgctggctcggaggattttagcctcatcgagtcactg
aaattttggaggacccgctttctgcttctgcctgcctgcatcagcgccacgaagcgcatc
atggaaggagaagtgcactgtgatgtgtatggtgacaagccccgctctgatgaggaggag
tggcagctcctagatggattcattcgctttgtggagggtttgaaccgcattcgtcgacgc
catcgatctgatcgaatgattcgaaaaggatctgccatgaaaggcttgcagattgctggt
cccattcccacccactctctggagcagtctgggcctcctattgggaagaaaggaacctcg
gcactctcggctctactggagatggaggccagtcagaagacgctgggggagcagcaagca
gcagtgctttctgggaagagctctgggcagccttcagagagcgggagcattgctatcaca
cccagctatatggacagccctcgcaaggatggggccttctttatggattttgttcgcagt
ccacgtacagcttcagccttctactcacaggtctctatagatcagtcagtccctgcagcc
tcagacggcagcacatcaatgaacacggggcagttacctgatcggggcaacactccagcc
ccgggaagttcccagagtgttggagagcaaggatgtgccacagccaatgctgcagagggc
agctcacagcagtgttcagcaagctctctgacttcctcctccaccctgatagagattctt
gaagccatgaaacaccccaccacagggatccagctgctctctgaacagaaggggctctcc
ccgtgctgtttcatcagcgcggaagtggtgcactggctggtgaacaatgtggaaggggtg
cagacccaggccatggccattgacatcatgcagaaaatgctagaagagcagcttattgtc
catgcctctggagaagctttacgaacctttatttatggtttttatttttacaagattgtt
gtggacaaagaaccagaccgagtgggcatgcagcagcctgccatgtggcacacggctgcc
atggatgacttctccgccttccagaggaaatggtttgaggtggcgtttgtggcagaggag
ctcctgcactcagacatccctgcgttcttcctgccctggctgcccagccgcccagcctcc
tatgcaagtaggcacagttcctttagccgcagtttcggaggacggagccaggcagcggca
ctcttagctgccacagtgcctgagcaacggacagtgacgctcgatgtggatgtgaataac
cgcacagaccgcttggagtggtgcagttgttattaccacggcaacttctccctcaacgcg
gccttcgaaatcaagttgcactggatggcggtgactgcagctgttctttttgagatggtt
cagggctggcatcggaaagccacgtcctgtggtttcttgcttgttccggtcttggaaggc
ccgtttgcactgcccagttacttatacggggacccacttcgagcccagttgttcatccca
ctcaacgttagctgcttgttgaaggagggtagtgagcatttgtttgatggctttgaacca
gaaacatactgggaccggatgcatctccttcaggaagcgatagcgtacagatttggattt
gtgcaagataaatactcggcctctgcattcaacttcccagctgagaacaaaccccagtac
attcatgtcacagggacggtgtttctgcagctaccgtattccaagcggaagttttcctgt
gggcagcagcgacgtcggcgcaactccacgagctccagcaaccagaacatgttttgtgaa
gagcgcattggctacaactgggcctacaacaccatgctgacgaaaacatggcggtccagt
gccactggggatgagaagtttgccgatcggctgctgaaagacttcacagacttctgctgg
aataaagacagccggctagtgacgttttggactgattgtctagataagatgcatgctagt
gctccgtga
DBGET
integrated database retrieval system
