Cuculus canorus (common cuckoo): 104068479
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Entry
104068479 CDS
T08597
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00600
Sphingolipid metabolism
cuca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104068479 (SMPD4)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
104068479 (SMPD4)
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Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
104068479
NCBI-ProteinID:
XP_053938585
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All DBs
Position
17:7096186..7113623
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AA seq
826 aa
AA seq
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MAGPHLQQPSFLLATLKADCINKPFVQRCHDLETVIEEFPAKELHGIFPWLVESIFGSLD
GIIVGWNLRCLQGRTNPTEYSVALDFLEPSGPMMKLVYKLQAEEYRYDFPVSYLPGPVKA
SIQEQVLPECSLYHNKVQFPSSGGLGLNLALNPFEYYMFYFAISLITQKNSPVTHHVSPS
NSAYFVLVDTYLKCFLPTEGSVLPPPSSNPGGAIPSPTPRSPAVPFTSYGMHHTSLLKRH
IAHQPSVNADPASQEIWRSETLLQIFVEMWLHHYSLEMYQKMQSPHVKLEVLHYRLSISS
KHHGSPAQSSYQALHAYQESFKPTEEHVLVVRLLVKHLHAFSNSLKPEPLSPSAHSHTAS
PLEEFKRVVIPRFVQEKLYIFLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKPPQST
EPFPRSVSEKWASFVQENLLMYTKLFVGFLNRALRTDLGSPKNALMVFRVAKVFAQPNLA
EMILKGEQLFLEPELGIPHRQHRIFMTPTLGGTFFSSWPQTITDASFKVKSHVYSLEGQD
FQYKQMFGAEVRNSVLKLAQVICQAQQMAKSISDHSAETTGPSFFSWFRFASSEMNGSYT
GNDLDEIGQDSIKKTDEYLEKALEYLCQIFKLNEAQLTQMMMKCGTAQDENGKRQLPDCI
ESEDGLILTPLGRYQIINGLRRFEVQYQGDTELQPIRSYENATLVRLLFRLSSALNERFA
DQMDALCSRQDFVGRLCRYHLTNPQLAQKMRCSPVVRDRMGQNWGPRLSLRFLASYRTLL
SLLLIYFTASWFHIGPVGCTFLILIGYFLYAVIMTFFSERWKPHEH
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggccggcccgcacctgcagcaacccagcttcctgctggccacgctgaaggcagactgc
ataaacaaaccctttgttcagaggtgccacgatctggaaacagtgatcgaggagtttccc
gccaaggaattacatggtatcttcccatggctggtggagagcatttttggtagcttggat
ggcatcatcgtaggctggaatcttcgctgtctgcaaggaagaacaaatcctactgaatat
tctgtggctttggatttcttggagcccagtggcccaatgatgaagctggtttacaaactt
caagcagaagagtacagatatgatttcccagtctcatatcttccaggccctgtgaaggct
tcaatacaagagcaagtcctgccagagtgctctttataccacaacaaagtccagtttcct
tcatctggtggtttgggtttgaatttggctcttaatccatttgaatattacatgttttac
tttgcgattagtttgattacacagaagaactcacccgtgacccatcatgtcagcccttcc
aacagtgcttatttcgtcttggtggacacgtacctgaagtgtttcctgcccaccgaagga
agtgtccttcctccaccttcttcaaaccctggaggagccatcccttccccaactcccagg
tctccagcagtgcccttcacgtcctatggcatgcaccacaccagcctgctgaagcggcac
atcgcccatcagccctccgtcaatgctgaccctgcttcccaagagatctggagatcggaa
acactgctgcagatctttgttgaaatgtggctccatcattactcactggaaatgtaccag
aaaatgcagtcccctcacgtcaagctggaggttctccactaccgactcagtatctccagt
aaacaccacggtagtcctgcccaatccagctaccaggccctccacgcataccaagaatcg
tttaagcccaccgaagagcacgtgctggtggtaagactgcttgtgaaacacctgcatgct
ttcagcaacagcttgaagccagagcctctgtccccttcagcccactcccacacagccagc
ccactcgaggagtttaagagggttgtgattcctcggtttgtccaggagaaactctatatc
ttcctgcagcactgctttggccactggcccctggatgcctctttccgggcagttctcgag
atgtggttaagttacttgcagccgtggagatatgctccagagaagccaccccaaagcaca
gagccctttcctcgcagcgtttcagagaaatgggcttcctttgttcaagaaaacttgctc
atgtatacgaagttgtttgtaggattcctgaacagagctcttcgaacagacctgggcagt
cccaaaaatgccctcatggtgttccgcgtggccaaggtctttgctcagcccaatctcgct
gaaatgatcttgaaaggagaacagttattcctggagccagaacttggtattccccatcgg
caacaccggatttttatgactcccacgcttggtgggaccttcttttcctcgtggcctcaa
actattacagatgcctcatttaaggtgaagagtcatgtttacagcctggaaggacaggac
ttccagtacaagcagatgtttggcgcagaagtcagaaattcggtgttaaaactggctcaa
gtcatttgtcaggcgcaacagatggcaaagtccatatcggaccattctgcagaaacaacc
ggcccatccttcttctcgtggtttagattcgcatcatccgagatgaatggttcctacaca
ggcaatgacctggatgaaattgggcaagacagcatcaaaaaaacagatgaatatttagag
aaggcgctggaatacttgtgccagatctttaagctgaatgaagcccagctgacacagatg
atgatgaagtgtgggacagctcaagatgagaatggaaaaagacagcttcccgattgcatt
gaaagtgaggatggcctcattcttacaccccttggcaggtaccagatcataaatggctta
cgtagatttgaggtgcagtatcaaggagataccgagcttcagcccatccgaagctatgaa
aatgccacccttgtccgcctcctgtttcgtttatcctcagcactgaatgaaaggtttgct
gatcagatggacgcgctttgctccaggcaagattttgtcggcagactttgtcgctatcac
cttaccaacccccagctggcacagaaaatgaggtgcagcccagtggtgagggacaggatg
ggccagaactgggggccgaggctcagcctgaggtttctggccagctacaggactctcctc
tctttgctgctgatctacttcactgcgtcctggttccacatcgggcccgtgggttgcaca
ttccttatcctgatcgggtatttcctgtatgctgtaatcatgactttcttctctgaacgc
tggaaaccacacgaacactga
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