Cuculus canorus (common cuckoo): 104068761
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Entry
104068761 CDS
T08597
Symbol
ARHGEF4
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 4
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104068761 (ARHGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104068761 (ARHGEF4)
Membrane trafficking [BR:
cuca04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104068761 (ARHGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
Amdo_NSP_1-3
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
104068761
NCBI-ProteinID:
XP_053930929
LinkDB
All DBs
Position
9:1276760..1461003
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AA seq
2250 aa
AA seq
DB search
MLSIMYFLRSFFKTPEPAENYISEGEFEDDLSSTPSMIELEIRGSSQETDEDYFETLSHQ
SGSLSDVKTEPYESVSDTESVSSDVTGETCLDSNCLVTEKKNLCCSLPKAKAGPTLQELK
CSRQLEFTQRVQLEVSSKTKVALSKTEFCIQTAKSEGEEPSDEELTLTSEISSRENRVSE
EGIIAQRNDRFAAVLQNKAQFESSKVQKCTSSVATEGDVTRQKAHPAGLSIACFRGSSES
CLFFPEAQRFSFQSDAASSCSLPNLPFETNGPDCRRYTDVSDYKHELDSMSSIKCSRRNS
ADGQETTGKRIKHGSTETILASDSLFCHSCFKSKSQPPLTRSEIMESKTWHSVPENINAQ
SKREHVGNCIHQTDKFRWSCSRIHLQGLDFEYAWKNLGRLPVSPEKAIKIEGKFGIKRSL
LNTDVDSKACQLSQPVGSPQCTECFHSKPETRGLSPEAESAYADSLSSTQTDACECNLKQ
KKTSSALHYEPVIINAEELIKSGQYKADRDLKADRIPWDIDVESGIGNTENLAACHVGFP
AVVENRDCDCSINCVSPGRIEQKSLEEDGLESKLSGMEIMVEEKWVDDSSNLDFSWKVLE
TTLQPGKNTGAEHKETMQQNTTGALRSHTELVTNEHLTHKEKDEDSVSAIEMSSRSDYIN
QGRHLMALAELKPALITVSVEQKGLQSKTLQDNLPTAAVTGTFRNVVSKNFTSPHTVSKA
HDAPERVLSESCSCKEETLATHPIPGSAEILLGRDKAEEILEFSQEKSEKTDAVSSLGLT
CSNSTETSAKMEFRGVTVPLGNGVLLAENQVDPCEEVLLKSHSRSGVIISEKDLCRTKTG
FDLEMGQFRKSPAETKDDQVSMEEEFKALQGREEDSCVTSATTLEMCSVSYLCQGESANV
DLQGPSITSEEAVGRQATGDWSNGSKEQIGTCEEPSSSEGKEGSSAEDTASPGKDSTLNL
DISDVFSDSEKRETHTTCMLGLDNISTCSTNSEEMDENLFHTLGSNTSLYKAAQKPTKNG
NSGKVSRFLVFSKMTSFRKTKPVTAENHGSSSFFGSKARMEELDAGKEDEDTESLQSFKS
CSSGSAFHRKESYASEYSDDDDLFYERPTGLFNRMSLRKASGSGRILMEDVDTNSTSPTL
AAVKYADQQVSGSSENNDSEPAEYSGIRKSFPENEYKRNKNPECKKFRTRLALAHKSLSS
LFESKSPEKENTEQSSRVSLKNEKEKAKLRQSTWKAFLKSKEADGLKRPVPASLSPTQES
LSAAGGQVMRAMSVERQDSSDEHTFLKAEIANSSLTDTNYFDTSAKPVDVSSPPGIWRKR
TQSHDLGIRCSQSSDCDEQQEALSNSLNTSLEEYWMKSPFSPTDSQLPFSQSSPSCPQLS
NSDGKDMPCRPMSPKPQSPRSTSQHKSFRYPGRICATSMISLGNSSVGEGNLEAPERPKT
LKPRGSLLLSVHSLDNEYQRDDSGISSQSQISLNTASSISDMLRDEESKQQWQMPPEKRP
NEKWVPHRKRRPPQVPPSPHPVSTLESKAWRLSILAPDEKAKEIPEKRRKRPKPLYRCFS
FDDVWMERNQKRKLEKETRPEKGIQLQHLPEDQLKAGRSPSIVSAVAFDILPLKLHPFSQ
STPTGLDCVGWKRRVSSPVITDGALDKTALTDDVGSEEDLYEDFRSSNHRYGHPGGGGEQ
LAINELISDGSVVYAEALWDHVTMDDQELGFKAGEVIEVMDATNKEWWWGRILDSEGWFP
ASFVRLRVNQDEPMEDYPLKVEGGKEDDSSSGTRRFGMGQTTKDQMRTNVINEIISTERD
YIKHLKDICEGYIKQCRKRADMFTEEQLKTIFGNIEDIYRCQKKFVKALEKKFNKDYPHL
SEVGSCFLEYQTEFQIYSEYCNNHPNACMELSRLTKVNKYVYFFEACRLLQKMIDISLDG
FLLTPVQKICKYPLQLAELLKYTNPQHRDFKDVEAALNAMKNVARLINERKRRLENIDKI
AQWQSSIEDWEGDDVLVRSSELIYSGELAKISHPQAKSQQRMFFLFDHQLVCCKKDLLRR
DILYYKSRINMDDMEILDVEDGKDKDFNISVKNAFKLHCRDTEEVHLFCAKKPEQKQRWL
KAFENERRQVQLDQETGFSITEVQKKQAMLNASKQHHTGKPKAVTRPYYDFLMRQKHPTL
PTTLPQQQVFMLAEPAQALELLAEHQQADALQEIRAAPCLCLNPFRESTLSIGPGRWSPG
SSNPLFTEDGTRAPAFPIYFADRPTALAPR
NT seq
6753 nt
NT seq
+upstream
nt +downstream
nt
atgctaagcataatgtattttcttcggagcttcttcaagaccccagagccagctgaaaac
tacatcagtgaaggagagtttgaagatgatctcagttctaccccgagtatgatagagctg
gagatacgtggatccagccaagaaacagatgaagattattttgagaccctgtcacatcag
agtggatctttgtcagatgtaaaaactgagccttatgagagcgtatcagacactgaatct
gtttccagtgatgtaactggggaaacttgcttggattccaactgccttgttactgaaaaa
aagaatctgtgctgcagtcttcctaaagcaaaggcaggaccgaccctccaggaactcaag
tgctcgaggcaactggaattcacccagcgggtgcagttagaggtgtcttccaaaacaaaa
gtagcactaagcaaaactgaattttgcatacaaactgcgaagtcagaaggtgaagaaccg
agtgatgaagagctaacattaactagtgaaatttccagcagagagaaccgagtcagtgaa
gagggcattatagcacagagaaatgacaggtttgcagcagtattgcaaaataaagcacag
tttgaaagcagtaaagtgcagaagtgtaccagctcagtagctacagaaggtgatgtgaca
agacagaaggcacatcctgcaggattaagcattgcttgtttcagaggaagctcagaaagt
tgtttgttttttcctgaggcacagagattttccttccagtcagatgcagcatcgagctgt
agtttgcctaatcttccttttgaaacaaatggacctgactgtagaagatacactgatgtg
tctgactataagcatgaattagattctatgtccagtataaaatgcagcaggaggaactcg
gccgacggtcaggaaactacaggtaaaaggatcaaacatggaagcacagagaccatattg
gcatcagattcactcttttgccacagctgcttcaaatcaaaatctcagccaccgctcaca
agatcagagattatggaaagtaaaacatggcacagtgtacctgaaaatatcaatgctcaa
agcaagagagaacatgtggggaactgtattcatcagacagacaaatttagatggtcatgt
tcaagaatacatcttcaagggctagattttgaatacgcttggaaaaacttaggaaggcta
cctgtaagccctgaaaaggcaatcaaaatagagggcaaatttggcatcaaaagatctctt
cttaatactgacgtagactcaaaggcgtgtcagctttctcagccagtaggctctccccag
tgcactgagtgttttcactctaaaccagaaacacgtggccttagcccagaagcagaaagt
gcatatgctgacagtttatcttctacacagactgatgcttgtgagtgcaatctgaaacaa
aaaaagacttcatctgctctgcactatgagccagtgatcataaatgctgaagaacttata
aaaagtggccagtacaaagctgacagagatctgaaagcagacagaatcccttgggatatt
gatgttgaatctggcattggcaacacagagaacctagcagcttgtcatgtaggttttcct
gctgttgtggaaaaccgagattgtgattgttctataaactgtgtttcccctggtaggata
gagcagaagagtttggaggaggatggccttgaatctaaactgtcaggtatggagataatg
gtagaggaaaaatgggtagatgattcttccaaccttgacttcagttggaaagtcctggaa
accactttgcaaccaggcaaaaacactggggcagagcacaaagagacaatgcagcaaaat
acaaccggtgccttaaggagtcacactgagcttgtaacaaatgaacatctgactcataaa
gaaaaggatgaagacagtgtctctgctattgaaatgtcttccagatcagattatataaac
cagggaaggcatttaatggctcttgcagagttaaagcctgccctaattacagtgtctgta
gagcagaaaggattacagtccaagacactgcaggataaccttcccactgcagcggtaact
ggaacctttagaaacgtagtgagcaagaatttcacatctcctcatactgtcagcaaagct
catgatgcaccagagagagttctgagtgaaagctgtagctgtaaagaagaaactctggcc
acccaccccattcctggtagtgcagagatactccttggtagggataaagctgaagaaata
ctggaattttcacaagagaaaagtgagaaaacagatgcagtttcatccttagggttgacc
tgtagtaattccacagaaacaagtgcaaagatggaattcaggggtgttaccgtaccactg
ggaaacggtgtgcttcttgcagaaaatcaggtagatccatgtgaagaagtgctcttaaaa
tcccacagcagaagtggtgttatcatctctgagaaagacctttgcagaactaagactggt
tttgatttagagatgggacaattcagaaagtcaccagctgaaacaaaagatgaccaagtg
tctatggaagaggaattcaaagcacttcaaggcagagaagaagactcatgtgtaaccagt
gcgacaacactggaaatgtgcagtgtaagctatttgtgtcagggagaatctgctaatgtt
gaccttcaagggcccagcatcacctctgaagaggcagtaggcaggcaagcaactggagac
tggagtaacggttcaaaggaacaaataggtacttgcgaagaaccttcttctagtgaagga
aaagagggttcttcagcagaagacacagctagccctggcaaagacagtactctgaacctg
gatatttctgatgtctttagcgattctgagaaaagggagacccataccacttgcatgctg
ggcctggacaacataagtacctgcagcaccaacagcgaggaaatggatgagaacttgttc
cacaccttgggaagtaacaccagtctctacaaagctgcgcaaaagccaacaaagaatggc
aatagtgggaaagtctccaggtttttagtgttctcaaaaatgacatctttcaggaaaacc
aagcctgtgacagcagaaaatcatggaagcagcagcttctttggcagcaaggcaaggatg
gaagagctggatgctgggaaagaggatgaagacactgaaagtttacagtctttcaaaagc
tgttcatctgggtcagccttccacaggaaggaaagttatgcctctgaatactctgatgat
gatgatttattctatgagagacctacaggattattcaacagaatgagcctgaggaaggct
tctggctctggtcggatactgatggaagatgtagacacaaattcaacttctcccacactg
gctgctgtcaaatacgcagatcaacaagtttcaggttcatctgaaaacaatgacagcgaa
cctgcggaatactctgggattagaaaatcattccctgaaaacgaatacaaaaggaacaaa
aaccctgaatgtaagaagttcaggacaaggttagccttggcacacaaatccctctcaagc
ttatttgaatccaaatctccagaaaaagaaaacactgagcaaagctcaagagtatcactg
aaaaatgaaaaggagaaagccaaacttcgccagagcacctggaaagcttttctaaaaagc
aaggaggcagatggactaaaaaggcccgtcccagccagtttatcaccaacgcaggagagt
ctcagtgcagctggaggccaggtgatgagagcaatgtcagtcgagcgacaggacagttct
gatgagcacacatttttaaaagcagaaatagctaatagctccttgacagacaccaactat
tttgacacctctgcaaagcctgttgatgtctcttcccctccaggtatatggagaaaaaga
acacagtcccatgacttgggcatcaggtgctcacagagttcagattgtgatgaacagcag
gaggctctgagcaacagtttaaatacctctctagaggaatactggatgaaatccccattt
agccccactgactcacagttgccatttagtcagtcaagcccatcatgtcctcagctctcg
aattctgatggtaaagacatgccttgtaggcccatgagtcctaaaccgcagagtccacgg
tccacttctcaacacaagagcttccgttatcctggaagaatatgtgccacttcaatgatc
tctcttgggaacagctctgtaggtgaaggcaatttggaggctcctgagagaccaaagaca
ctgaaacccagaggtagtctcttactttctgtacactcattggacaatgaataccagagg
gatgacagtggcataagcagccaatcccagatcagcttaaacacggcttcttccattagt
gacatgctccgagatgaggagtctaaacagcaatggcaaatgccacccgaaaagcggcca
aatgagaaatgggttccccaccgcaaaagaaggccccctcaggttccaccatccccacac
cctgtctccacccttgagagcaaagcctggaggctttctatccttgctccagatgaaaaa
gccaaggagattccagagaagaggaggaagagacctaaacccctctataggtgcttcagc
ttcgatgatgtgtggatggagaggaaccaaaaaaggaagctagagaaggagacacggcca
gagaaagggattcaattgcaacacctcccagaggaccagttaaaagctggaagaagtcca
tccatcgtgtctgctgttgcctttgacatcctaccgctgaaacttcatcccttttcccag
agcactccaacaggcttagactgcgtgggctggaaacgccgcgtctcctctcctgtgatc
actgatggggcactggataagacagctctgacagatgatgttggaagtgaagaagacctg
tatgaggacttccgaagctccaaccaccgctacggccaccctgggggaggtggagagcag
cttgccatcaatgagctcatcagtgatggcagcgtcgtgtatgcagaagccctctgggac
catgtcacgatggatgaccaagagctgggattcaaggctggcgaggtcattgaagtaatg
gatgctaccaacaaggagtggtggtgggggaggattctggacagcgaaggctggtttcca
gccagctttgtacggctgcgagtaaaccaggatgaaccgatggaagattatcccctgaag
gtggagggtggcaaggaggacgattccagcagtggcacccgccgattcgggatggggcag
accaccaaagatcaaatgaggaccaacgtcatcaatgagatcataagcacagagcgagac
tacataaaacatctgaaggatatttgtgagggttacattaagcagtgccgcaaaagagct
gacatgtttacagaagaacagctgaagacaatctttgggaatattgaggacatatacagg
tgccagaagaaatttgttaaagcgctagagaagaaattcaataaagactatccccatctg
agtgaggtcggctcatgcttcctggaatatcaaacagagtttcagatatactcggaatac
tgcaacaaccaccccaacgcctgcatggagctctcccgcctcaccaaagttaacaagtac
gtctacttctttgaagcctgccgcctgctgcagaagatgattgacatctctctggatggg
tttctgctgactcctgtgcagaagatctgcaaatatccactgcagttggctgagctgctc
aaatacaccaacccccagcacagggattttaaagatgttgaagctgccttgaatgctatg
aagaacgtcgctcggctcatcaatgagagaaagcggcggctggagaacattgacaagatt
gctcagtggcagagttcgatagaagactgggagggtgatgatgtcctagtcagaagctca
gaactcatctattctggagaattagccaagatctcccaccctcaagccaagagccaacag
aggatgttcttcctcttcgatcaccagctcgtctgctgcaagaaggaccttctgcgccgg
gacatcttgtattataagagtcggatcaacatggatgatatggaaatactggatgtagag
gatgggaaggacaaagacttcaatatcagtgtgaaaaatgcatttaagttgcactgccga
gacactgaagaggtccacttattctgcgcaaaaaagcctgagcagaaacagcggtggctg
aaggcatttgagaacgaaaggagacaggttcagcttgaccaggagacgggtttttcaatc
acagaggtacagaaaaagcaggcgatgctgaatgccagcaagcagcaccacactgggaag
cctaaagctgtcaccaggccatactatgacttcctgatgcgccagaagcatcccaccctg
ccgacgacgctccctcagcagcaagtcttcatgctggcagagcccgcgcaagccctcgaa
cttctggcagaacatcagcaggctgacgcccttcaggaaataagggcagccccatgtttg
tgcctgaaccccttccgagaaagcactttatccatcggtcctgggaggtggagcccaggt
tcttccaatcctttgtttacagaggatggcacacgtgctcctgccttccctatttatttt
gccgaccgaccaaccgcactggctccgaggtga
DBGET
integrated database retrieval system
