Cuculus canorus (common cuckoo): 104068832
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Entry
104068832 CDS
T08597
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104068832 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104068832 (EXOSC7)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104068832 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
104068832 (EXOSC7)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104068832
NCBI-ProteinID:
XP_009570051
UniProt:
A0A091GCD7
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Position
2:114134187..114157337
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AA seq
291 aa
AA seq
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MASVVLSEAEKLYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPDEGYLEFFVDCSANATPEFEGRGGEELGSEIASTLYSVFSSGSTID
LKSLCINPREHCWVLYVDVLLLECGGNLFDAISLAVKAALFNTRIPKVCVLEDEEGSKEI
ELSDDPYDCIRLNVDNVPCIVTLSKIGYRHVVDATLQEEACCLASLLISVTSNGAFTSMK
KVGKGSLDPESIFEMMETGKRVGKSLHIALQKILDEEESLGTSRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggtgctgagcgaggccgagaaactctacatcgtgcatggcgtccaggag
gaccttcgtgtagatggtcgtggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagtggatctgcaagagtaaagctgggacacactgatatcttggtt
ggtgtaaaagctgaaatggggacgccaaagttggagaagccggatgaaggttacctggaa
ttctttgttgactgttctgcaaacgctactcctgaatttgaaggccgtggaggagaagag
cttggctcagagatagcaagtacactctacagtgtgtttagcagcgggagcactatagac
ttgaaatcactttgtattaatcccagagagcactgctgggttctctatgttgatgtattg
ttactggaatgtggagggaacctctttgatgcaatttctcttgcagtgaaggcagctctg
tttaatacaagaatccccaaagtgtgtgtcctggaggatgaagaaggctctaaagagatt
gagttgtctgatgacccttatgattgtattcgacttaacgtggataacgtgccctgcatt
gtcacgttaagtaaaattggatataggcatgtggtggatgctacccttcaggaagaagcc
tgttgtttggccagccttcttatttctgtgaccagtaacggcgccttcacttctatgaag
aaagtgggaaaaggtagccttgatcctgagagtatctttgaaatgatggagacggggaaa
agagtaggcaaatcattgcacatagcccttcagaagattttggatgaagaagagagtttg
gggacctcacggcagaaagttggatttctaggatga
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