Cuculus canorus (common cuckoo): 104068984
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Entry
104068984 CDS
T08597
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04620
Toll-like receptor signaling pathway
cuca04621
NOD-like receptor signaling pathway
cuca04622
RIG-I-like receptor signaling pathway
cuca04623
Cytosolic DNA-sensing pathway
cuca05164
Influenza A
cuca05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104068984 (IRF7)
04621 NOD-like receptor signaling pathway
104068984 (IRF7)
04622 RIG-I-like receptor signaling pathway
104068984 (IRF7)
04623 Cytosolic DNA-sensing pathway
104068984 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104068984 (IRF7)
05168 Herpes simplex virus 1 infection
104068984 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104068984 (IRF7)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104068984 (IRF7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
SHQ1
Motif
Other DBs
NCBI-GeneID:
104068984
NCBI-ProteinID:
XP_053923968
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Position
5:44447826..44451427
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AA seq
493 aa
AA seq
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MAASDTQGAAPKLRFAPWLLSAVDSGRFHGLRWTEPGRAFRVPWKHNARRDLTRTDLEVF
KAWAEASGRYEGCPEQPAKWKTNFRGALTSTGMFKLLEDNSKSGDDPHKVFTIVSGNHGP
TKGCVGDEMELNPEDVPPEITLPGSTDPTQPLMLEDMEILQQVLQLCNISSRDLDSPAPS
WVPAGDIRHQNTLLQPHPDLSQNSCFPLPAHQQWLPMAEEPLLGACSNLDPMLMEEKGAM
LPPCHTPEVTVPMPSPGEAILSAPTTSPVPPPQPPDDNTDGIISILDISIYYRGKLFHQE
VVRSSQCLLVYQTSDPAVALRPGQLVHFPSPAELADGKQRRYTEKLLYSTGLQLEQRDCK
LFATRLKKCKVFWALSQQLECIGDPPPNQLCRDQETPIFDFNEFCTELRDFRNHQRQRSP
DFTIYLCFGQSFKRKPKESKLILVKLVPKFCEYWYEQVLREGASSLDSGTISLQLSNSFS
LFELIEQYDMQTD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgacacgcagggggccgccccgaagctgcggttcgcgccgtggctgctc
agcgccgtcgacagcgggaggttccacgggctgcgatggaccgagcctggccgagccttc
cgcgtcccctggaagcacaacgccaggagggacctcacccgcacagacctcgaggtcttc
aaggcctgggcagaggcgagtgggcggtatgaggggtgccctgagcaaccagccaaatgg
aagaccaacttccgcggtgccctgacaagtactggcatgttcaagctgctggaggacaat
tccaagtctggtgatgacccgcacaaggtcttcaccattgtttccggcaatcatgggccc
acaaagggctgtgttggagatgagatggagctcaaccccgaagatgtacccccagaaatc
accctcccaggcagcaccgaccccacacaacccctaatgctggaggacatggagatattg
caacaggtgctgcagctgtgcaacatctccagccgtgacctagattccccagccccatcc
tgggtgcctgcaggggacatccgccaccaaaacaccctgctccagcctcacccagatctc
agccaaaacagctgctttcccctgccagcacatcagcaatggttgcccatggcagaggag
cccctgttgggtgcctgtagcaacctggaccccatgctgatggaggagaaaggggccatg
ctaccaccgtgccacacaccagaggtcacggttcccatgccatccccaggggaagccata
ctctccgcccccaccaccagtcctgtgccaccgccacagccaccagatgataacacagat
ggcatcatctcaatcctggacattagcatctactaccgggggaagctcttccaccaggag
gtggtgagaagcagccagtgcctgctggtgtaccagacctctgacccggcagtggccctg
cgccctgggcagctggtgcactttcccagccccgctgagctggctgatggcaagcagcga
cgttacaccgagaagctgctgtacagcacaggactgcagctggaacaacgcgactgcaag
ctttttgccacccgcttgaagaagtgcaaggtcttctgggccctgtcccagcagcttgag
tgcatcggagacccaccacccaatcagctctgccgggaccaggaaacccccatctttgac
ttcaatgagttttgcacagagctgagggacttccgcaatcaccaaaggcaacggtcgcct
gacttcacgatctacctctgcttcgggcagtccttcaagcgcaagcccaaggaatccaag
ctcatcctggtcaagctggtgcccaagttctgcgagtactggtacgagcaggtgctgcgg
gagggagcctcctcccttgacagtggcaccatcagcctgcagctctccaactcattcagc
ctcttcgagctcattgagcagtacgacatgcagacggactga
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