Cuculus canorus (common cuckoo): 104069046
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Entry
104069046 CDS
T08597
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104069046 (DSCAML1)
Cell adhesion molecules [BR:
cuca04515
]
Immunoglobulin superfamily
Other
104069046 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
104069046
NCBI-ProteinID:
XP_053942779
LinkDB
All DBs
Position
23:complement(5199283..5317435)
Genome browser
AA seq
2042 aa
AA seq
DB search
MWLVTFFLLYSLRKAHAEDVGTSLYFVNDSIQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVVVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRTNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSSSSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
MLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSDRGKSVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPCP
VVPPREASIRNLARTYHAQARHLTLEPGTKPLGLPPPASAATTLPQRTLPMPSTTGTTAA
PTASAAPVPAAATEPPATTEARVPTHSKVGGSRDSLLEMSTSGVGRSQKQGAGAYSKSYT
LV
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttttcctgctgtactctttgcggaaagcacatgctgaagatgtt
ggaaccagcctctactttgtgaacgactctatccagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtccttcggtggtacctg
gccacaggcgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaacgactac
ttctgcaccgcggagaactcggccggcaaaatcaggagcccaaatatccgtgttaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccttcttcagtgcaggaatacgttagtgttgtgtcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttacggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggagccaggctctcggtctcagacccg
gcagagtccatcccgacgatgctagacagcttccagtccagggaggtgaaggcaggccgg
ctggtggagctgccctgcatcgcttcgggttaccccaaccccgccgtccggtggatcaag
gatgggcgcccgctccccgccgacagccgctggaccaagcgcatcacgggcctgaccatc
agcgacctgcgcgtggaggacagcgggacctacatctgcgaggtgaccaacaccttcggg
tccgcagaggtcacggggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacgggcatcggcagcaccgtcatcctctcttgtgcccttagcgggtcc
cctgagtacgtcatccgctggtaccgcaacacggacctcgtggtggtggatgactacatc
tccatccgggggatcagcaacgagaccctactcatcacggctgcgcagaagagccactcc
ggggcgtaccagtgcttcgccacccgcaagtcccagacggcacaggacttctccatcatc
acactggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctcatgtgtgccgccaagggggccccgccgccgaccgtcacctgg
gcgctggatgatgagcccatcccgcgggacagcgggcaccgcaccaaccagtacaccatg
tcggacggcaccaccgtcagccacatgaacgtgacgagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtccaccgagcatccgagcgatgaagaacataacagcggtagcgggtagggac
actttcatcaactgcagggtgatcgggtacccgtattactccatcaagtggtacaaggac
tctttgctgctgcccgataaccaccgccaagtggtctttgagaacgggactcttaaactg
atggacgtccagaaaggcatggatgaaggagagtacctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcacagtgaaagtccctccgctgatccagccc
ttcgagttcccaccagcctccatcgggcagctcctctacatcccctgcgtggtctcctcc
ggggacatgcccatccacatcacctggaggaaggacggccacgtcatcctctccggttct
ggagtcaccatcgaaagcaaggagttcatgagctccctgcagatctccagcgtctccctc
aagcacaacggcaactacacctgcatcgccagcaacgacgctgccacggtcagccgggag
cgtcagctcatcgtgcgggtgcctcctcgttttgtggtccaacccaacaaccaagacggc
atttacggtaaagccggggtgctgaattgctccgtcgatgggtacccccctccgaaagtc
atgtggaagcacgcaaaaggaagcggcaacccccagcagtaccaccccatacccctcacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggggtgggcacagacatcagcaagtccatg
tttctcaccgtgaagatcccggctatgatcacctcccaccccaacaccaccatcgccatc
aaagggcagaccaaggagctgaactgcaccgcccggggcgagcgacccatcatcatccgc
tgggagaagggcgacaccgtcatcgaccccgaccgtaacatgcgttatgccatcaccacc
aaggataacggcgacgaggtcatctccaccctcaagctgaaaccagctgaccgcggggac
tcggtcttcttctcctgtcacgccattaattcctacggtgaggacagaggcttgatccag
ctcaccgtccaagagcccccggacccgccagagctggagatccgcgaggtgaaagcccgg
agtatgaatttgcgatggacgcagcggtttgatggcaacagcatcatcactgggttcgat
atcgagtacaagaacaagtcggattcctgggattttaagcagtctacgcgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctccatcctgcctccgtctacagtatccgc
atgtactccttcaacaagatcgggcgcagcgagccgagcaaggagctcaccatcagcacg
gaggaagcagctcctgatgggccaccgatggatgtcaccttgcagccgatgacatcccag
agcatccaggtcacctggaaggcgccaaagaaggagctgcagaatggggtgatccgtggc
taccagattgggtaccgggagaacagcccgggcagcaacgggcagtacagcatcgtggag
atgaaagccacgggggacagcgaggtctacacgctggacaacctgaagaagtttgcccag
tacggcgtggtggtgcaggcgttcaaccgcgcggggacggggccgtcgtccagcgagatc
aacgccaccacgctggaggacgttcccagccagccccccgagaacgtgcgggccatctcc
atcacatcggacgtggccgtgatctcgtggtcagaacccccgcgcagtaccctcaacggg
gtgctcaaagggtaccgggtcatcttctggtccctctacatggatggagagtggggtgag
atgcagaacatcacgaccacgcgggagcgagtggagctgcggggcatggagaagttcacc
aactacagcgtgcaggtgctggcgtacacccaggccggtgatggggtccgcagcagcgtg
ctctacatccagaccaaagaggacattccaggtcccccggccggcatcaaggctgtccca
tcttcctctagcagcgtggtggtgtcctggttgcctccagccaagcccaacggcatcatc
cggaaatacaccatcttctgctccagccccggctcggggcagccggcccccagcgagtac
gagaccagtccggaccagctcttctaccgcatcgcccacctgaaccgcgggcagcagtac
atgctctgggtggctgccgtcacctccgccggtcgcggcaacatcagcgagaaagtcacc
atcgagcccgctgggaaagcccctgccaagatcatctccttcggaggcaccgtcaccacg
ccgtggatgaaggacgtgaggctgccctgcaactctgttggggagccggtccctgctatc
aagtggacgaaggacagcgaggactctgccatccctgtgacggtggacggccaccgcctg
atccaggctaatggcacgctggtgctgcgctcggtgaaagccgaggactccggctactac
acctgcacggccaccaacacctggggcttcgacaccatcatcatcaacctgctggtgcaa
gtgcccccggaccagccccgcctgaccgtctccaagacctcagcatcatccatcacgttg
gcctggattcctggggacaatgggggcagctccatccgaggtttcgtgctccagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctcttccgagcgctccttcaag
ctggagagcctcaagtgcggcacctggtacaaggtgaagctggcggccaagaacagcgtg
ggcgccgggcgcatcagcgagatcatcgaagccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcaccgccatcgtcctggagtaccggccgaagggc
aactgggtctggcagagcctccgaaccaatagctccagcgaggtcttcctgacggagctg
cgcgaggccacgtggtacgagctccgtatgaaggcgtgcaacagcgctggctgcggcaat
gagaccacccagttcgccacgctggactacgatggcagcaccatcccccctatcaagtct
gcccaaggggagggcgatgacgtgaagaagctcttcaccatcgcctgccccgtcatcctg
gccacgctgggagtggctttgctcttcatcatccgcaagaagaggaaggagaagcggctg
aagaggcttcgagatgccaagagtttggctgaaatgctcatcagcaagaataaccgcagc
tttgacacgccggtgaagggccccccgcaaggcccccgactgcacatcgacatcccccgc
gtgcaactcctcatcgaggacaaggagggcatcaagcagctgggggatgacaaagccacg
atcccggtgaccgacacggagttcagtcaggcggtgaacccccagagcttctgcacaggc
gtctcgctgcatcaccccgctctgatccagaacacggggcccctcattgacatgtccgac
atccgccccggcaccaaccccgtgtcgaggaagagcgtgaagtctgcacacagcacccgc
aaccggtattccagtcagtggaccctcaccaagtgccaggcatccaccccggcgcggacc
ctcacctctgactggaggacagtgggctcccagcacggcatcaccgtcaccgagagcgac
agctacagcgccagcctctctcaggacacagacaaggggcggaacagcatggtgtcgaca
gagagtgcctcgtccacctacgaggagctggcacgcgcctacgagcatgcgaagctggag
gagcagctgcagcacgccaagttcgagattacggagtgcttcatctccgacagctcctct
gaccagatgaccaccggcaccaccgacaacgccgacagcatgacctccatgagcactccc
tccgagcccggcatctgccgcttcacagcctccccacccaaaccccaggacagcgaccgg
ggcaagagcgtggccgtgcccatcccgcaccgggccagcaagagcgactactgcaacctc
cctctctacgtcaagtcggaggccttcttccgcaagcccgatgcccacgagccctgcccg
gtggtgccgccgcgggaagcctccatccgcaacctcgcccggacctaccacgcgcaagcg
cggcacctgacgctggagcctggcaccaagcccctggggctgcctcccccagcctccgcc
gcaaccaccttacctcaacggactctccccatgcccagcaccaccggcaccaccgccgcg
cccaccgccagcgccgctccggtgcccgctgctgccaccgagccccccgccaccaccgag
gcgcgggtgcccacacactccaaagttgggggctcgagggactcactcctagaaatgagc
acgtcgggggtagggcggtctcaaaaacagggggctggagcctactccaagtcctatacg
ctggtgtag
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