Cuculus canorus (common cuckoo): 128849611
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Entry
128849611 CDS
T08597
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03320
PPAR signaling pathway
cuca04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128849611 (RXRB)
03320 PPAR signaling pathway
128849611 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
128849611 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cuca03310
]
128849611 (RXRB)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128849611 (RXRB)
Nuclear receptors [BR:
cuca03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
128849611 (RXRB)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
128849611
NCBI-ProteinID:
XP_053907993
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Position
31:complement(1163503..1180798)
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AA seq
438 aa
AA seq
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MGDSDRDCRSPDSSSLSASPEPTVPRSAMTSLPPLGSPFPVISSSLGSPGLPPAPALAYG
PVSSPQINSTVNLSGLHPVSSSEDVKPPLGLRSVSSHPHGPSGAGKRLCAICGDRSSGKH
YGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCVVDKRQRNRCQYCRYQKCLATGMKREAVQ
EERQRGKEKESDGDVGVNANEEMPVEKILEAELAVEQKSDQNVDGSGGGGGGGGTSPNDP
VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI
LLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLS
NPGEVELLREKVYASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD
TPIDTFLMEMLEAPHQLS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcgaccgcgattgccggagccccgacagctcctccctgagcgcctctccg
gagccgacggtgccgcgttcggccatgacctcgttaccaccgttgggatctccgttcccg
gtcatcagctcctcgttaggatctccaggacttcctccggcaccggctttggcctacgga
cccgtcagtagtcctcagatcaactccaccgtcaacctctcgggtctccaccccgtcagc
tcttcggaggacgtgaagcccccgttgggccttcgctccgtctcctctcacccccacggt
ccctccggcgccgggaaacgcctctgcgccatctgcggcgatcgctcctcagggaagcat
tatggggtgtacagctgcgaaggttgcaaagggttcttcaagagaaccatccggaaggac
ctcacctacacctgtcgggacaacaaagattgcgtcgtggacaaacgccaacgcaaccga
tgtcaatactgtcgctaccagaagtgtttggccaccggcatgaagcgagaagccgttcaa
gaagaacgtcaacgcgggaaagagaaagaaagcgatggcgatgtgggagtcaacgccaac
gaggaaatgccggtggagaagatcttagaagccgaattggccgtcgaacagaaatcggac
caaaacgttgacggttccggtggtggtggtggcggtggcggcacttcgcccaatgacccg
gtgaccaacatctgccaggccgccgacaagcagctcttcactctggtcgagtgggccaag
aggatcccccacttctccgagttaccgttggatgaccaagtgattctcctgagggccggg
tggaacgagctgctgatcgcctccttctcgcatcgctccatcgcggtgaaggatgggatc
cttttggccacggggctgcacgtccaccgcaacagcgcccacagcgccggcgtaggggcc
atcttcgaccgggttctgaccgaactggtctccaagatgcgggacatgcggatggacaag
acggaactcggttgcctccgcgccatcatcctcttcaaccccgatgctaaaggtctttcc
aatcccggtgaggtggaactcctccgcgagaaggtttacgcgtctttggaatcttattgc
aaacagaaatatccggagcaacagggaaggtttgcaaagcttctcctccgtctcccggct
ctgcgctccatcggtctcaagtgtttggagcatcttttcttcttcaaactcatcggggat
acccccatcgacactttcctcatggagatgctcgaagccccccaccagctctcctga
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